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 * [[http://wiki.cytoscape.org/Cytoscape_3/AppDeveloper/Cytoscape_App_Ladder|App Ladder]] - Start page for app developers
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 * [[http://wiki.cytoscape.org/Cytoscape_3/UserManual|Latest Manual (Wiki version)]]  * [[http://manual.cytoscape.org|Latest Manual]]


Cytoscape is an open source platform for network data integration, analysis, and visualization. (Read more about Cytoscape...)

About Cytoscape Wiki

This is a wiki for both Cytoscape users and developers. If you find problems, or have suggestions, please let us know.

How to Edit

  • To edit wiki pages, ask an existing wiki user to create a name and temporary password for you at sign up for an account, then ask the wiki user to add your new user name to the editor list. Once this is complete, you can log in using your name and temporary password, then change your password. To edit a page, surf to the page and use the Edit button in the upper left corner.

  • Tips for editing

  • See all pages in this wiki

For Users

For Developers

Using Cytoscape



Cytoscape 3.x Development

Past Discussion about Cytoscape Architecture

Cytoscape 2.x Development

Attension App Developers: Cytoscape 2.x Series is in Maintenance Mode

If you are planning to develop a new Cytoscape App, we strongly recommend to use Cytoscape 3.x series. Cytoscpae core team is working on Cytoscape 3.x code base only and no new features will be added to 2.x series.

Testing Cytoscape

Welcome (last edited 2016-04-26 22:30:33 by server2)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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