Cytoscape Wiki
Request for Comments (RFCs)
About RFCs
RFCs represent one possible mechanism for soliciting feedback for core Cytoscape features / refactoring. For details on RFCs in general, check out the [http://www.answers.com/main/ntquery?method=4&dsid=2222&dekey=Request+for+Comments&gwp=8&curtab=2222_1&linktext=Request%20for%20Comments Wikipedia Entry: Request for Comments (RFCs)]
RFC Template
Creating a new RFC? Use the ["RFC_Template"] and add a link to table below.
RFC Index
Name of RFC |
Date of RFC Creation |
Target |
Status |
Please add your next RFC here... |
... the date |
... the target release |
... and the status |
[:CytoscapeThemes: RFC 54]: Cytoscape Themes: A Pinch of Syntactic Sugar |
2007-10-24 |
3.0 |
open |
[:CytoService: RFC 53]: SubgeneViewer: Cytoscape from Service Provider Perspective |
2007-10-23 |
2.7 |
open |
[:EventHandling: RFC 52]: Event Handling System |
2007-10-23 |
3.0 |
open |
[:CytoscapeProject: RFC 51]: Cytoscape Projects |
2007-10-23 |
3.0 |
open |
[:TaskManagement: RFC 50]: Task Management |
2007-10-17 |
3.0 |
open |
[:GroupViews: RFC 49]: Viewing groups |
2007-09-26 |
2.x |
open |
[:CytoscapePluginBundles: RFC 48]: Plugin Themes |
2007-09-13 |
2.6 |
being coded |
[:PluginRefactor: RFC 47]: Plugin Interface Refactor |
2007-08-24 |
3.0 |
open |
[:CytoscapeLayerRefactor: RFC 46]: Cytoscape Layers Refactor |
2007-08-16 |
3.0 |
open |
[:BioWebServiceConnectivity:RFC 45]: Web Services Client Manager and Unified Network/Attribute Import Mechanism |
2007-08-15 |
2.6 |
being coded |
[:DependencyManagement:RFC 44]: Build Process/Dependency Management |
2007-08-01 |
3.0 |
open |
[:ExcentricLabelRFC:RFC 43]: Excentric Labeling in Cytoscape |
2007-07-26 |
2.x |
being coded |
[:TaskMonitorRefactoring:RFC 42]: Task Monitor Refactoring |
2007-07-26 |
3.0 |
open |
[:Consolidated_graph_analysis_plugin:RFC 41]: Consolicated Graph Analysis Plugin |
2007-07-24 |
2.x |
open |
[:Scripting:RFC 40]: Scripting in Cytoscape |
2007-07-24 |
3.0 |
open |
[:DataIntegration:RFC 39]: Data Integration/Web Services |
2007-07-19 |
2.x |
being coded |
[:CodeLayering:RFC 38]: Code Layering |
2007-07-18 |
3.0 |
open |
[:AttributeNamespaces:RFC 37]: Attribute Namespaces |
2007-06-27 |
3.0 |
open |
[:LayoutImprovement:RFC 36]: Layout Improvement |
2007-06-26 |
2.5 |
closed |
[:Molecular Interaction Maps:RFC 35]: Molecular Interaction Maps |
2006-10-10 |
3.0 |
open |
[:UserTraining: RFC 34]: User Training Strategy |
2007-05-18 |
3.0 |
open |
[:Filters_UI_Redesign:RFC 33]: Filters UI Redesign |
2007-04-25 |
2.6 |
being coded |
[:RichLineTypes:RFC 32]: rich linetypes |
2007-04-22 |
3.0 |
open |
[:LocalAttributes:RFC 31]: Implement local (per-network) attributes |
2007-04-22 |
3.0 |
open |
[:UndirectedEdges:RFC 30]: Making undirected edges first-class citizens |
2007-04-22 |
3.0 |
open |
[:WebServicesIDMapping:RFC 29]: Web services API for ID mapping/translator service |
2007-04-13 |
2.6 |
being coded |
[:MultilevelLayout:RFC 28]: Multilevel graph layout algorithm |
2007-02-15 |
2.6 |
being coded |
[:BubbleRouterRFC:RFC 25]: Bubble Router Plugin |
2007-01-19 |
2.6 |
being coded |
[:ImportExportMenus:RFC 23]: Cleaning up the import/export file menus |
2007-01-08 |
3.0 |
open |
[:GuiTesting:RFC 21]: User interface testing framework |
2006-10-31 |
3.0 |
open |
[:HeadlessModeRFC:RFC 6]: Cytoscape headless mode operation |
2006-01-27 |
3.0 |
open |
Completed RFCs
[:Pluginwebsite:RFC 27]: Plugin Web site and auto import |
2007-02-07 |
2.5 |
closed |
[:PerformanceProfilingRFC:RFC 26]: Performance Profiling |
2007-02-06 |
2.5 |
closed |
[:VizMapUI:RFC 24]: Visual Mapping GUI Redesign |
2006-01-10 |
2.5 |
closed |
[:SingleInstanceWebstart:RFC 22]: Creating single instance webstarts |
2006-12-12 |
2.5 |
closed |
[:TextFileImport:RFC 20]: General Text/Excel file import framework |
2006-10-11 |
2.5 |
closed |
[:HyperEdgeAPI:RFC 19]: HyperEdge API |
2006-09-12 |
2.5 |
closed |
[:groupAPI:RFC 18]: Group API (replaces RFC 8 and RFC 9) |
2006-08-16 |
2.5 |
closed |
[:ImportableFileTypeRFC:RFC 17]: Importable File Type |
2006-03-14 |
2.4 |
closed |
[:SimpleTextTableImport:RFC 16]: Text Table Network File Import |
2007-01-19? |
2.5 |
closed |
[:CytoscapeIcons:RFC 15]: New Icon Set for Cytoscape 2.4 |
2006-07-19 |
2.4 |
closed |
[:QuickFindRFC:RFC 14]: Quick Find Feature |
2006-07-05 |
2.4 |
closed |
[:BioDataServerRFC:RFC 13]: New Bio Data Server (Gene Ontology Server) |
2006-06-22 |
2.4 |
closed |
[:VizMapPropsRFC:RFC 12]: Fixing the loading and saving of the vizmap.props file |
2006-03-07 |
2.4 |
closed |
[:UndoManager RFC 11]: Cytoscape Undo Manager |
2006-01-26 |
2.5 |
closed |
[:PreferenceInitializationRFC:RFC 10]: Preferences initialization |
2006-03-22 |
2.4 |
closed |
[:SimplifiedMetaNodeDataStructureRFC:RFC 9]: Simplified MetaNode Data Structure |
2006-01-27 |
2.4 |
closed |
2006-01-18 |
2.4 |
closed |
|
[:ImportableFileTypeRFC:RFC 7]: Adding support for additional file types |
2006-03-14 |
2.4 |
closed |
[:Wiki clean-up RFC 5]: Wiki clean-up |
2006-02-23 |
2.5 |
closed |
[:License clean-up RFC 4]: Java code license clean-up |
2006-02-16 |
2.4 |
closed |
["RFC 3"]: Migrating the user manual to the wiki |
2005-12-25 |
2.4 |
closed |
["RFC 2"]: Improving the quality of the Cytoscape 2.3 release |
2005-11-28 |
2.4 |
closed |
["RFC 1"]: Migrating GraphObjAttributes to CyAttributes |
2005-09-30 |
2.3 |
closed |