Subgraph/Metanode/Module

(Under Construction)

New File Format: Simple Subgraph Format (SSF)

Example

DOT Format:

graph G {
  e
  subgraph clusterA {
    a -- b;
    subgraph clusterC {
      C -- D;
    }
  }
  subgraph clusterB {
    d -- f
  }
  d -- D
  e -- clusterB
  clusterC -- clusterB
}

SSF:

clusterA    a    ud    b
clusterC    C    ud    D
clusterB    d    ud    f
-           e    ud    clusterB
-           d    ud    D
-    clusterC    ud    clusterB
clusterA    clusterC

Outdated_Cytoscape_3.0/ModelDiscussions/Subgraph (last edited 2011-02-24 15:38:33 by PietMolenaar)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.