← Revision 1 as of 2009-03-13 18:53:45
674
Comment:
|
← Revision 2 as of 2011-02-08 23:52:46 →
703
|
Deletions are marked like this. | Additions are marked like this. |
Line 5: | Line 5: |
This is a quick guide how to compile and run Cytoscape 3 application with Maven. | This is a quick guide how to checkout and run Cytoscape 3 application with Maven. |
Line 10: | Line 10: |
* JDK 5 or 6 | * JDK 6 |
Line 17: | Line 17: |
First, you need to check out Cytoscape 3. |
First, you need to check out Cytoscape 3 GUI distribution bundle: {{{ svn co http://chianti.ucsd.edu/svn/core3/gui-distribution/trunk/ gui-distribution }}} |
Line 21: | Line 25: |
cd gui-distribution | |
Line 25: | Line 30: |
{{{ mvn pax:run }}} If you want to see the log messages from infrastructure bundles (such as message from Spring DM or Felix), you can add the following option |
|
Line 32: | Line 32: |
mvn pax:run "-Dprofiles=log" |
cd distribution/target/cytoscape-${version}-null.dir/cytoscape-${version} cytoscape.sh |
Quick Start Guide for Cytoscape 3 Developers
(Under construction!)
Introduction
This is a quick guide how to checkout and run Cytoscape 3 application with Maven.
Setup
You need the following tools on your machine.
- JDK 6
- Apache Maven
- Subversion client
Procedure
Checkout code from SVN
First, you need to check out Cytoscape 3 GUI distribution bundle:
svn co http://chianti.ucsd.edu/svn/core3/gui-distribution/trunk/ gui-distribution
Compile
cd gui-distribution mvn clean install
Run Application
cd distribution/target/cytoscape-${version}-null.dir/cytoscape-${version} cytoscape.sh