Diff for "WebServiceWorkflow"

Differences between revisions 1 and 2

Sample Workflows Using Web Service Clients

This is a simple example workflow with web service clients.

File-->Import-->Import network from web services...
Select NCBI as datasource and type human muscular dystrophy as search keyword
Press Search. Number of candidates will be displayed. Then press OK. This process takes a long time.
File-->Import-->Import Attributes from NCBI Entrez Gene...
Select ID as key attribute and check all available annotations
Press Import. Again, this process takes a long time depends on network connection.
Based on the attributes imported, visualize the network. (Example below: edge color is mapped to data source of the interaction, and phynotype is mapped to node color. Red border shows the node is on a known KEGG/Reactome pathway.
- attachment:workflow1.png

-  ← Revision 1 as of 2008-02-07 21:57:28 →
  Size: 517
  Editor: KeiichiroOno
  Comment:
+  ← Revision 2 as of 2008-02-07 22:31:35 →
  Size: 1310
  Editor: KeiichiroOno
  Comment:
-Deletions are marked like this.
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+. '''''File-->Import-->Import network from web services...'''''

 1. Select '''NCBI''' as datasource and type ''human muscular dystrophy'' as search keyword

 1. Press '''Search'''.  Number of candidates will be displayed.  Then press OK.  This process takes a long time.

 1. '''''File-->Import-->Import Attributes from NCBI Entrez Gene...'''''

 1. Select '''ID''' as key attribute and check all available annotations

 1. Press '''''Import'''''.  Again, this process takes a long time depends on network connection.

 1. Based on the attributes imported, visualize the network.  (Example below: edge color is mapped to data source of the interaction, and phynotype is mapped to node color.  Red border shows the node is on a known KEGG/Reactome pathway.

 

  attachment:workflow1.png