Request for Comments (RFCs)

About RFCs

RFCs represent one possible mechanism for soliciting feedback for core Cytoscape features / refactoring. For details on RFCs in general, check out the [http://www.answers.com/main/ntquery?method=4&dsid=2222&dekey=Request+for+Comments&gwp=8&curtab=2222_1&linktext=Request%20for%20Comments Wikipedia Entry: Request for Comments (RFCs)]

RFC Index

• ["RFC 1"]: Migrating GraphObjAttributes to CyAttributes

• ["RFC 2"]: Improving the quality of the Cytoscape 2.3 release
• ["RFC 3"]: Migrating the user manual to the wiki

• [:License clean-up RFC 4]: Java code license clean-up

• [:Wiki clean-up RFC 5]: Wiki clean-up

• [:HeadlessModeRFC:RFC 6]: Cytoscape headless mode operation

• [:ImportableFileTypeRFC:RFC 7]: Adding support for additional file types

• [:MetaNodes RFC 8]: MetaNodes

• [:SimplifiedMetaNodeDataStructureRFC:RFC 9]: Simplified MetaNode Data Structure

• [:PreferenceInitializationRFC:RFC 10]: Preferences initialization

• [:UndoManager RFC 11]: Cytoscape Undo Manager

• [:VizMapPropsRFC:RFC 12]: Fixing the loading and saving of the vizmap.props file

• [:BioDataServerRFC:RFC 13]: New Bio Data Server (Gene Ontology Server)

• [:QuickFindRFC:RFC 14]: Quick Find Feature

• [:CytoscapeIcons:RFC 15]: New Icon Set for Cytoscape 2.4

• [:SimpleTextTableImport:RFC 16]: Text Table Network File Import

• [:ImportableFileTypeRFC:RFC 17]: Importable File Type

• [:groupAPI:RFC 18]: Group API (replaces RFC 8 and RFC 9)

• [:HyperEdgeAPI:RFC 19]: HyperEdge API

• [:TextFileImport:RFC 20]: General Text/Excel file import framework

• [:GuiTesting:RFC 21]: User interface testing framework

• [:SingleInstanceWebstart:RFC 22]: Creating single instance webstarts

• [:ImportExportMenus:RFC 23]: Cleaning up the import/export file menus

• [:VizMapUI:RFC 24]: Visual Mapping GUI Redesign

• [:BubbleRouterRFC:RFC 25]: Bubble Router Plugin

• [:PerformanceProfilingRFC:RFC 26]: Performance Profiling

• [:Pluginwebsite:RFC 27]: Plugin Web site and auto import

• [:MultilevelLayout:RFC 28]: Multilevel graph layout algorithm

• [:WebServicesIDMapping:RFC 29]: Web services API for ID mapping/translator service

• [:UndirectedEdges:RFC 30]: Making undirected edges first-class citizens

• [:LocalAttributes:RFC 31]: Implement local (per-network) attributes

• Please add your next RFC here...

RFC Template

Creating a new RFC? Use the: RfcTemplate