Differences between revisions 8 and 9
Revision 8 as of 2005-10-21 21:16:06
Size: 1147
Editor: mskresolve-b
Comment: Updated status on a few items.
Revision 9 as of 2005-10-21 21:17:35
Size: 1232
Editor: mskresolve-b
Comment:
Deletions are marked like this. Additions are marked like this.
Line 2: Line 2:

Stuff that is now done:
Line 7: Line 9:
  * Remove {{{CytoscapeData}}} and {{{CytoscapeDataImpl}}} from core (Ethan) [Done: 10/21/2005]
Line 9: Line 12:
  * Implement {{{GraphObjAttributes}}} (Nerius) [In Progress]
Stuff that is still in the works:
* Implement {{{GraphObjAttributes}}} (Nerius) [Almost done]
Line 12: Line 17:
    * Write Unit Test (Ethan)     * Write Unit Test (Ethan) [Partially complete]
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  * Remove {{{CytoscapeData}}} and {{{CytoscapeDataImpl}}} from core (Ethan) [Done: 10/21/2005]

Implementation Plan for RFC #1

Stuff that is now done:

  • Finalize CyAttributes API, based on public review [Done: 10/13/2005]

  • Agree on way to access global attributes and implement [Done: 10/17/2005]
  • Deprecate all attribute access methods in Cytoscape.java and CyNetwork.java (Ethan) [Done: 10/17/2005]

  • Revert Cytoscape.java and CyNetwork.java to return GraphObjAttribute for backward compability (Ethan) [Done: 10/17/2005]

  • Remove CytoscapeData and CytoscapeDataImpl from core (Ethan) [Done: 10/21/2005]

  • Implement CyAttributesImpl [Done: 10/15/2005]

    • Write Unit Test (Ethan) [Done: 10/15/2005]

Stuff that is still in the works:

  • Implement GraphObjAttributes (Nerius) [Almost done]

    • Write Unit Test (Ethan) [Done: 10/21/2005]
  • Write CyAttributesReader (Nerius) [In Progress]

    • Write Unit Test (Ethan) [Partially complete]
  • Write CyAttributesWriter (Nerius) [In Progress]

    • Write Unit Test (Ethan)
  • Replace all calls to GraphObjAttributes with calls to CyAttributes (Iliana)

  • Verify that all references to GraphObjAttributes have been removed

  • Celebrate

RFC_1/RFC1_Implementation_Plan (last edited 2009-02-12 01:03:00 by localhost)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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