Cytoscape Wiki
NetworkAnalyzer: Computation and Visualization of Topological Parameters and Centrality Measures for Biological Networks
Yassen Assenov, Nadezhda Doncheva, Thomas Lengauer, and Mario Albrecht
Department of Computational Biology and Applied Algorithmics, Max Planck Institute for Informatics, Campus E1.4, 66123 Saarbrücken, Germany'
Biological Use Case: Analyse a biological network and discover its topological properties.
Recipe
Cytoscape version: 2.6
Plugins to Load: NetworkAnalyzer (http://med.bioinf.mpi-inf.mpg.de/netanalyzer/), IntActWSClient
GUI steps:
Describe each step (story), the GUI action to take, and probable remarks
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Remarks |
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Data / Session Files: Attach (preferably) a session file or else the data files used in the workflow
Presentation: Attach your presentation
Webstart: Attach a webstart
Video: Attach a video link