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Shared MimEditorUseCaseComments
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Shared MimEditorUseCaseComments

Use Case Name : CoordinateSystem

For Feature : MIMEditor

Editors: DavidKane

TableOfContents([2])

Summary

A user wants to reference particular sections of a map

Step-by-Step User Action

  1. User specifies a map should have a coordinate system
  2. User species a physical size for the map
  3. User specifies the number of coordinate system categories
  4. The system draws axes on the left and top

Visual Aides

The following map includes the coordinate system:

attachment:coordinatesystem1_061115_dwk.png

Requirements for Cytoscape

This may not require an underlying model representation, unless there is an effort to annotate the coordinates of features in the map.

Impact on the visualizer, TBD

Importance

This is not a key language constructs of the maps, but is useful for large maps. Coordinates are important to refer readers to particular parts of the map, for example, when the maps are used to illustrate review articles. Smaller maps tend to not have a coordinate system.

Other Examples

Comments

Shared MimEditorUseCaseComments

Would not appear to have a BioPAX representation.

PageComment2

Molecular_Interaction_Maps/CoordinateSystem (last edited 2009-02-12 01:03:51 by localhost)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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