Diff for "McodePluginDemo"

Differences between revisions 2 and 3

Title: MCODE - Molecular Complex Detection plugin

Abstract:

MCODE finds clusters (highly interconnected regions) in a network. Clusters mean different things in different types of networks. For instance, clusters in a protein-protein interaction network are often protein complexes and parts of pathways, while clusters in a protein similarity network represent protein families.  This presentation will introduce MCODE and discuss new features that are under development.

Data keywords: protein-protein interaction, protein-dna interaction, genetic interaction, protein similarity network

Cytoscape keywords: network clustering algorithm

Publications

Bader GD, Hogue CW
An automated method for finding molecular complexes in large protein interaction 
networks
BMC Bioinformatics. 2003 Jan 13;4:2. Epub 2003 Jan 13

http://www.biomedcentral.com/1471-2105/4/2

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  Editor: GaryBader
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+== Publications ==



{{{

Bader GD, Hogue CW

An automated method for finding molecular complexes in large protein interaction 

networks

BMC Bioinformatics. 2003 Jan 13;4:2. Epub 2003 Jan 13

}}}

http://www.biomedcentral.com/1471-2105/4/2