Cytoscape Wiki|
Size: 588
Comment:
|
Size: 1283
Comment:
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 1: | Line 1: |
| First, some tests. | [[TableOfContents]] |
| Line 3: | Line 3: |
| Some links: | = Personal Info = |
| Line 5: | Line 5: |
| * HelpContents |
My name is Márcio Rosa da Silva and you can contact me at: mmrsva (a) gmail com I am a PhD student at the [http://www.gbf.de/SystemsBiology Systems Biology group] of the [http://www.gbf.de German Research Center for Biotechnology] in [http://www.braunschweig.de Braunschweig], Germany. I work at [http://www.unisinos.br UNISINOS] (Universidade do Vale do Rio dos Sinos), a university in south of Brazil as an assistant professor. = Cytoscape work = == Plugins == I developed some plugins for Cytoscape. They can be downloaded from here: |
| Line 9: | Line 19: |
| Docs: | == Documents == |
| Line 11: | Line 21: |
| * EclipseAndCytoscapeDevelopment | I have worked with many languages before, but Java is something new to me. I decided to learn it because I wanted to write plugins for Cytoscape. So I have run into some problems in the beginning, like: "how to start?" :-) So I decided to write some documents about this experience. I'll put this documents here at the wiki and in the '''csresources''' page. Up to now, I wrote only one. It can be found here: |
| Line 13: | Line 23: |
| * SettingUpEclipseForPluginDevelopment | |
| Line 14: | Line 25: |
| Some tests with code listings: | = Wiki Tips = |
| Line 16: | Line 27: |
|
{{{#!python for node in nodes: print node.getNeighbors() }}} {{{#!java for (int i=0; i<nodes.lenght;) { System.out.println(nodes[i].getLabel()) } }}} Is HelpOnParsers/ReStructuredText supported on this wiki? {{{#!rst Test of ``RST`` syntax: *italics*, **bold**... List: - test of list in RST - second item pre-formated text:: bla, bla, bla }}} No! :-) |
* If you want to find all pages linking to a page in the wiki, click on the title of the page. It will return a ''full text search'' of the title. |
Personal Info
My name is Márcio Rosa da Silva and you can contact me at: mmrsva (a) gmail com
I am a PhD student at the [http://www.gbf.de/SystemsBiology Systems Biology group] of the [http://www.gbf.de German Research Center for Biotechnology] in [http://www.braunschweig.de Braunschweig], Germany.
I work at [http://www.unisinos.br UNISINOS] (Universidade do Vale do Rio dos Sinos), a university in south of Brazil as an assistant professor.
Cytoscape work
Plugins
I developed some plugins for Cytoscape. They can be downloaded from here:
Documents
I have worked with many languages before, but Java is something new to me. I decided to learn it because I wanted to write plugins for Cytoscape. So I have run into some problems in the beginning, like: "how to start?" 
So I decided to write some documents about this experience. I'll put this documents here at the wiki and in the csresources page. Up to now, I wrote only one. It can be found here:
Wiki Tips
If you want to find all pages linking to a page in the wiki, click on the title of the page. It will return a full text search of the title.