Cytoscape WikiList of developers and their roles, so people know who to ask questions to.
Note: the official list of developers is on http://cytoscape.org/people.php
Principal Investigators:
- Leroy Hood - Director at ISB
- Trey Ideker - PI at UCSD
- Chris Sander - Director at MSKCC
- Benno Schwikowski - PI at Pasteur
- Annette Adler - Manager at Agilent
Developers
- Iliana Avila-Campillo - Developer at ISB
- 2.0 refactoring
- Richard Bonneau - Manager at ISB
Gary Bader - Manager at MSKCC
- Ethan Cerami - Developer at MSKCC
- Task API
- Partial Vizmapper refactoring
- Rowan Christmas - Developer at ISB
CytoscapeData interface
- Filters
- Original GINY (graph library)
- Many, many core aspects of Cytoscape 2.0 application - menus, initialization, yLayouts, context menu, etc.
- 2.0 refactoring
- Wrote a lot of the original plugin tutorial content
- Melissa Cline - Developer at Pasteur
- Documentation and web tutorials
- Ben Gross - Developer at UCSD
- Ryan Kelley - Developer at UCSD
- Filters
- Nerius Landys - Developer at UCSD
- Refactored GINY into FING (graph library)
Internal implementation of node/edge attributes (CyData)
- Keiichiro Ono - Developer at UCSD
- OBO wizard
- Mike Smoot - Developer at UCSD
- Michael Creech - Contractor for Agilent
HyperEdge API
Allan Kuchinsky - Agilent
- Graph editing
- Interfaces to BIND, Reactome databases
- Aditya Vailaya - Agilent
HyperEdge API
Previous developers
- Nada Amin
- Mark Anderson (UCSD - Ideker)
- Help system
- Preferences dialog
- Larissa Kamenkovich (ISB - Bolouri)
- Andrew Markiel (ISB - Schwikowski)
- 2.0 refactoring
- Owen Ozier (MIT - Ideker)
- Visual mapper
- Paul Shannon (ISB)
- Original Cytoscape developer - set up many core concepts e.g. plugins
- Robert Sheridan (MSKCC - Sander)
- Hierarchical layout
- Jonathan Wang (MIT - Ideker)
- Visual mapper
Please edit/fix this list as you see fit.
Note: This list is likely to be imcomplete and out of date. Check the CVS commit messages for a class of interest to see who has worked on it.