Differences between revisions 6 and 12 (spanning 6 versions)
Revision 6 as of 2012-07-02 20:59:03
Size: 273
Editor: KeiichiroOno
Comment:
Revision 12 as of 2012-07-02 21:45:24
Size: 2254
Editor: KeiichiroOno
Comment:
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
== Tools Menu Test Cases == == Network Analyzer Test Cases ==
|| '''Preconditions'''|| '''Test Case ID'''||'''Instructions'''||'''Expected Results'''|| '''Date Executed'''||'''Pass/Fail'''||
||<|2> 1. Start Cytoscape<<BR>>2. Load galFiltered.sif ||NA1||Run ''Analyze Network'' command as undirected|| || || ||
||NA2||Run ''Analyze Network'' command as directed|| || || ||
Line 3: Line 6:
Test document is available as a [[https://docs.google.com/spreadsheet/ccc?key=0Aogl87Wb8gAmdDIxUFQ1a09SaXF6bWJ0NEdZTlBlQUE#gid=0|Spreadsheet at Google Docs]]
Line 5: Line 7:
=== Test Data Files for This Section === == Command Test Cases ==
|| '''Preconditions'''|| '''Test Case ID'''||'''Instructions'''||'''Expected Results'''|| '''Date Executed'''||'''Pass/Fail'''||
||<|2> 1. Start Cytoscape ||CM1||Load a sample command file||Script runs and creates a new network|| || ||
||CM2||Select List All Commands menu||A dialog appears and all commands should be displayed|| || ||
Line 7: Line 12:
{{createNetwork.js|create network}}
== Scripting Test Cases ==
|| '''Preconditions'''|| '''Test Case ID'''||'''Instructions'''||'''Expected Results'''|| '''Date Executed'''||'''Pass/Fail'''||
||<|1> 1. Start Cytoscape <<BR>> 2. Import two network files: (eg. galFiltered.sif) ||SC1||Load a sample script||Script runs and creates a new network|| || ||


== Network Merge Test Cases ==
|| '''Preconditions'''|| '''Test Case ID'''||'''Instructions'''||'''Expected Results'''|| '''Date Executed'''||'''Pass/Fail'''||
||<|3> 1. Start Cytoscape <<BR>> 2. Import two network files: (eg. galFiltered.sif and BINDyeast.sif) <<BR>>3. Click on Plugins and select Advanced Network Merge <<BR>>4. Select each network from the available networks box and then click the right arrow to move them to the selected networks box. <<BR>>5. Click OK to merge the selected networks (Note: with large networks Cytoscape may not automatically create a graphical view, so click on the Edit menu with the network highlighted and click on Create View)||GM1||Before precondition step 5 select the Union operation||A new graph should be created displaying the merged networks (If this does not happen see preconditions Note)|| || ||
||GM2||Before precondition step 5 select the Intersection operation||A new graph should be created displaying the common nodes from the two networks|| || ||
||GM3||Before precondition step 5 select the Difference operation (order matters)||A new graph should be created displaying the parts of the first network that are not in the second network|| || ||

Network Analyzer Test Cases

Preconditions

Test Case ID

Instructions

Expected Results

Date Executed

Pass/Fail

1. Start Cytoscape
2. Load galFiltered.sif

NA1

Run Analyze Network command as undirected

NA2

Run Analyze Network command as directed

Command Test Cases

Preconditions

Test Case ID

Instructions

Expected Results

Date Executed

Pass/Fail

1. Start Cytoscape

CM1

Load a sample command file

Script runs and creates a new network

CM2

Select List All Commands menu

A dialog appears and all commands should be displayed

Scripting Test Cases

Preconditions

Test Case ID

Instructions

Expected Results

Date Executed

Pass/Fail

1. Start Cytoscape
2. Import two network files: (eg. galFiltered.sif)

SC1

Load a sample script

Script runs and creates a new network

Network Merge Test Cases

Preconditions

Test Case ID

Instructions

Expected Results

Date Executed

Pass/Fail

1. Start Cytoscape
2. Import two network files: (eg. galFiltered.sif and BINDyeast.sif)
3. Click on Plugins and select Advanced Network Merge
4. Select each network from the available networks box and then click the right arrow to move them to the selected networks box.
5. Click OK to merge the selected networks (Note: with large networks Cytoscape may not automatically create a graphical view, so click on the Edit menu with the network highlighted and click on Create View)

GM1

Before precondition step 5 select the Union operation

A new graph should be created displaying the merged networks (If this does not happen see preconditions Note)

GM2

Before precondition step 5 select the Intersection operation

A new graph should be created displaying the common nodes from the two networks

GM3

Before precondition step 5 select the Difference operation (order matters)

A new graph should be created displaying the parts of the first network that are not in the second network

Cytoscape_3/Cy3TestPlan/tools_menu (last edited 2012-07-09 21:56:57 by KeiichiroOno)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

MoinMoin Appliance - Powered by TurnKey Linux