Cytoscape 3 Documentation : Getting Started

Editor(s): SamadLotia

Date: December 5th 2011

Status: First version


This document covers how to fetch the Cytoscape 3 source code from our repository, how to build using Maven, and how to get Cytoscape 3 running. In addition, it covers how to make your first changes to the core code and then rebuild and run.

Check out, build and run

  1. Clone the git repositories and build the core.

  2. Go to gui-distribution/assembly/target/cytoscape, then run if you're on Mac or Linux or cytoscape.bat if you're on Windows.

Modifying a bundle

Cytoscape_3/CoreDevelopment/GettingStarted (last edited 2013-03-21 19:33:45 by 192)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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