Compatibility

This page summarizes the platforms Cytoscape 3 has been tested on and any workarounds that need to be done to get it to install and launch.

Testers: Please ensure you try running the default installed edition of Java for each platform. If Java does not come pre-installed, install whatever default is given at http://java.com.

OS

Version

Architecture

JDK/JRE

Compatible?

Last Tested

Notes

Mac OS

10.8.1

x86_64

Apple JDK 1.6.0_35

Yes

7-Sep-2012

1, 2

Oracle JDK SE 7u7

1, 2

10.7.4

x86_64

Apple JDK 1.6.0_35

Yes

7-Sep-2012

1

Oracle JDK SE 7u7

1

10.6

x86_64

1

10.5

x86_64

1

Windows

8

AMD64

Oracle JRE 1.7.0_05

Yes

6-Sep-2012

1

x86

1

7

AMD64

Oracle JRE 1.7.0_02

Yes

6-Sep-2012

1

x86

1

Ubuntu Desktop

12.04 LTS

amd64

OpenJDK JDK 1.7.0_3

Yes

7-Sep-2012

1

i386

OpenJDK JDK 1.7.0_3

Yes

7-Sep-2012

1

11.10

amd64

Oracle JDK SE 7u7

1

  1. Haven't tested installer on this platform yet.
  2. The default Gatekeeper settings cause an error saying the DMG is damaged. We need to sign our installer DMG somehow to avoid this. Users can work around this by disabling Gatekeeper temporarily (System Preferences → Security & Privacy → Allow applications downloaded from → Anywhere)

Cytoscape_3/Compatibility (last edited 2012-09-07 22:15:15 by server2)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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