Cytoscape_2.6/Test Plan - 2.6/Core Plugins Test Cases/cPath_TestCases_2.6

Preconditions

Test Case ID

Instructions

Expected Results

Windows

Mac

Date Executed

Pass/Fail

Date Executed

Pass/Fail

1. Start Cytoscape
2. Click File → New → Network → Create network using cPath…

C1

1. Click the Help button

A window entitled Quick Reference Manual should appear describing the basics of using cPath searches

May 19th 09

P

C2

Click the About button

A widow containing details on the cPath plugin should appear

May 19th 09

P

C3

1. Select All Organisms and type “p53” into the search field
2. Set the limit to 10 and click search

cPath should generate a network containing genes related to p53 for all organisms in the list

May 19th 09

P

C4

1. Select C. elegans and type “rpl-12” into the search field
2. Set the limit to 20 and click search

cPath should generate a network containing the genes related to rpl-12 in C. elegans

May 19th 09

P

C5

1. Select D. melanogaster and type “DPP” into the search field
2. Set the limit to 50 and click search

cPath should generate a network containing the genes related to DPP in D. melanogaster

May 19th 09

P

C6

1. Select E. coli and type “LacI” into the search field
2. Set the limit to 100 and click search

cPath should generate a network containing the genes related to LacI in E. coli

May 19th 09

P

C7

1. Select H. Sapiens and type “CD4” into the search field
2. Set the limit to 500 and click search

cPath should generate a network containing the genes related to CD4 in H. sapiens

May 19th 09

P

C8

1. Select H. pylori 26695 and type “” into the search field
2. Set the limit to 1000 and click search

This appears to be broken at the moment since no search is returning any results

C9

1. Select M. musculus and type “CLCA” into the text field
2. Set the limit to 5000 and click search

cPath should generate a network containing genes related to CLCA in M. musculus

May 19th 09

P

C10

1. Select S. cerevisiae and type “STE7” into the search field
2. Set the limit to 10 and click search

cPath should generate a network containing genes related to STE7 in S. cerevisiae

May 19th 09

P

C11

1. Select R. norvegicus and type “BKCa” into the search field
2. Set the limit to 20 and click search

cPath should generate a network containing the genes related to BKCa in R. norvegicus

May 19th 09

P