Presenter: Laetitia Morrison, University of Toronto, Canada

Title: GOSlimmer: Creating custom GO Slim sets in Cytoscape


GOSlimmer is a plug-in built for Cytoscape that allows the user to interactively manipulate a Gene Ontology (GO) network to create a GO slim term set that optimally covers a gene set of interest. In addition, it provides the capability to export a gene annotation file containing only the Gene Ontology terms included in the GO slim set.

CytoscapeRetreat2008/Laetitia (last edited 2009-02-12 01:03:33 by localhost)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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