Presenter: Daniel Abel, Dept. of Biological Physics, ELTE, Hungary

Title: Undirected edge support in cytoscape3


I will be describing the changes expected in cytoscape3 to support
undirected edges. True support for undirected edges has been a
long-standing whishlist item for cytoscape. With the upcomming 3.0,
cytoscape will fully support undirected edges and mixed networks
(which contain undirected and directed edges).

This support, however, will mean that some semantic changes are
needed. I will describe these changes and their impact on users and
plugin developers.

slides: DanielAbel-Toronto-CyRetreat08-slides.pdf

pretty much the full content of the talk is available at DanielAbel/EdgeDirectionality

CytoscapeRetreat2008/Daniel (last edited 2009-02-12 01:03:27 by localhost)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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