Use Case Name : ...

For Feature : ...

Editors: ...

TableOfContents([2])

Summary

We would like to be able to represent detailed sub-gene data in a second window after selecting a node from the parent graph. These below use cases apply to datasets where many different pieces of data (e.g. probesets or interaction partners) are available, that themselves can be represented as distinct nodes. Examples include individual probes or replicate spots from a microarray dataset, data from distinct time-point comparisons in a dataset polymorphism data from whole genome SNP experiments*, exon and exon-junction specific data*, ChIP on chip experiment data* and interaction partners for a node in the parent network*. Examples with an astrick are illustrated below.

Visual Aides

Requirements for Cytoscape

Importance

Other Examples

Comments

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Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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