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| '''Goal:''' help users learn to use Cytoscape to answer biologically relevant questions by providing information, tutorials and linking new with experienced users. | '''Goal:''' Help users learn to use Cytoscape to answer biologically relevant questions by providing information, tutorials and linking new with experienced users. |
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== Meeting 1 – introduction and organization == * Date: [http://tdccbr.med.utoronto.ca/Home.aspx?event_id=8281&PageID=111&view=event_view Mon.Feb.4 at 3pm, CCBR Red Room] * Widely advertised – posters, mailing lists * Cytoscape introduction presentation and demo (Gary Bader) - review biological questions can be answered using Cytoscape * Central meeting organization page on Cytoscape wiki “TorontoUserGroup” * Sign up to Google Group mailing list – cytoscape-toronto@googlegroups.com – have an email sign up sheet at the meeting to get this list started * Group homepage: http://groups.google.com/group/cytoscape-toronto?hl=en * Develop list of experienced Cytoscape users in Toronto |
== Meeting 1 – Introduction and organization == * Date & Location: [http://tdccbr.med.utoronto.ca/Home.aspx?event_id=8281&PageID=111&view=event_view Mon.Feb.4 at 3pm, CCBR Red Room] * Cytoscape introduction presentation and demo (Gary Bader) - review biological and other network analysis questions that can be answered using Cytoscape * Discuss organization of regular Cytoscape user group meetings * Central meeting organization page on Cytoscape wiki “TorontoUserGroup” * Sign up to Google Group mailing list – cytoscape-toronto@googlegroups.com – have an email sign up sheet at the meeting to get this list started * Group homepage: http://groups.google.com/group/cytoscape-toronto?hl=en * Develop list of experienced Cytoscape users in Toronto * Decide * Meeting frequency? Monthly or every 2 months? * Duration? 1 hour? * Location: CCBR Red Room * Ask participants for suggestions for things to discuss at normal meetings |
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'''Decisions''' * Meeting frequency? Monthly or every 2 months? * Duration? 1 hour? * Location: CCBR Red Room |
'''Please Contribute''' * Help us advertise - please forward this information to a friend. |
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| * Nature Protocols | * Review [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=pubmed&Cmd=ShowDetailView&TermToSearch=17947979 Nature Protocols] paper about Cytoscape |
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| * Ask participants for suggestions for things to discuss at normal meetings |
Cytoscape User Group, Toronto (CyT.O.)
Goal: Help users learn to use Cytoscape to answer biologically relevant questions by providing information, tutorials and linking new with experienced users.
Meeting 1 – Introduction and organization
Date & Location: [http://tdccbr.med.utoronto.ca/Home.aspx?event_id=8281&PageID=111&view=event_view Mon.Feb.4 at 3pm, CCBR Red Room]
- Cytoscape introduction presentation and demo (Gary Bader) - review biological and other network analysis questions that can be answered using Cytoscape
- Discuss organization of regular Cytoscape user group meetings
Central meeting organization page on Cytoscape wiki “TorontoUserGroup”
Sign up to Google Group mailing list – cytoscape-toronto@googlegroups.com – have an email sign up sheet at the meeting to get this list started
Group homepage: http://groups.google.com/group/cytoscape-toronto?hl=en
- Develop list of experienced Cytoscape users in Toronto
- Decide
- Meeting frequency? Monthly or every 2 months?
- Duration? 1 hour?
- Location: CCBR Red Room
- Ask participants for suggestions for things to discuss at normal meetings
Please Contribute
- Help us advertise - please forward this information to a friend.
Normal meetings
- Tutorial/discussion about specific Cytoscape topic. Topics selected from a list, by demand/request from participants
- Potential tutorial topics
Review [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=pubmed&Cmd=ShowDetailView&TermToSearch=17947979 Nature Protocols] paper about Cytoscape
Specific plugins e.g. BiNGO, MCODE, ActiveModules
- Developer plugin writing tutorial
- How to test Cytoscape and provide feedback to the core developers to make Cytoscape better.
- User experience and feedback sessions
- Cytoscape news – status of latest Cytoscape development, new papers using Cytoscape, developer participants, recently released plugins