Cytoscape 3.0 Use Cases

Please write the use cases in terms of Cytoscape, meaning talk about node, edges, and attributes rather than talking about proteins and interactions. Instead, use specific biological discussions to illustrate instances of particular use cases. Try to be as general as possible. Try to see how your use case might match another use case that already exists.

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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