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 * Genentech Hall, 4th floor, UCSF Mission Bay, San Francisco  * Genentech Hall, 4th floor, [http://pub.ucsf.edu/missionbay/ UCSF Mission Bay], 600 16th St. San Francisco, CA 94158
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 * Hotels: [http://www.bookability.net/b2/hoteltop.php?pcod=&month=11&day=13&year=2008&nightstay=2&submit=Check+Availability&bubmit=bubmit&origdate=&numberrooms=1&siteid=394&hnum=195 The Powell Hotel], other recommendations coming...
 * Schedule: THUR - nothing planned; FRI - all day meeting, breakfast and lunch on campus, dinner reservations will be made in advance; SAT - pastries and coffee provided in the morning, lunch on campus.
 * The Official Hotel!
   * The Queen Anne is particularly recommended [http://www.queenanne.com/] ($125; It's not close by, however. We would have to organize pick ups/ drop offs)[http://channels.isp.netscape.com/whatsnew/package.jsp?name=fte/bedbugs/bedbugs&floc=wn-nx Check for bed bugs]!
 * Transportation: You can take [http://www.bart.gov/guide/airport/inbound_sfo.aspx BART] to and from the SFO airport. And there is the [http://transit.511.org/schedules/index.aspx#m1=S&m2=rail&routeid=26606&cid=SF K/T-line train] that connects downtown SF to the campus (takes ~20min)
 * Schedule: THUR - nothing planned; FRI - all day meeting, breakfast and lunch on campus, dinner reservations for 6:30PM at [http://www.kohsamuiandthemonkey.com/dinner_menu.htm Kohsamui & The Monkey (thai)] ; SAT - pastries and coffee provided in the morning, lunch on campus.
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 * TBA  * View''''''Model
  * Daniel's pluggable renderers
   * Questions for Daniel:
    1. What are the possible memory costs for having pluggable renderers (not detailed -- approximate)?
    1. What are the performance implications?
    1. How do we serialize these?
 * Begin Presentation API
  * UI Events and how they interact with Cytoscape Events
 * Work Layer (Command, Tunables)
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== Goal === == Goal ==
 * Finish the View''''''Model
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Mini-Retreat Two

  • November 14-15, 2008
  • Genentech Hall, 4th floor, [http://pub.ucsf.edu/missionbay/ UCSF Mission Bay], 600 16th St. San Francisco, CA 94158

  • Alex's cell: 415-328-3967

Logistics

Topics for Discussion

  • ViewModel

    • Daniel's pluggable renderers
      • Questions for Daniel:
        1. What are the possible memory costs for having pluggable renderers (not detailed -- approximate)?
        2. What are the performance implications?
        3. How do we serialize these?
  • Begin Presentation API
    • UI Events and how they interact with Cytoscape Events
  • Work Layer (Command, Tunables)

Goal

  • Finish the ViewModel

Pre-meeting Comments

Meeting Notes

Outdated_Cytoscape_3.0/MiniRetreatTwo (last edited 2011-02-24 15:40:08 by PietMolenaar)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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