Diff for "Outdated_Cytoscape_3.0/EventHandling/EventsIn2.6"

The following is a list of events used in 2.x

This list should be considered as a list of usecases for 3.0's event framework

VistaClaraPlugin

Events Consumed

• JTable, column listener, Column Header Selection

  MouseMotionListener, scrollbar adjustment,

  KeyListener

  ListSelectionListener

  event.ActionListener--button and menu actions

Cytoscape

• beans.PropertyChangeListener (Cytoscape.SESSION_LOADED) Cytoscape.NETWORK_LOADED - update UI buttons Cytoscape.NETWORK_DESTROYED - update UI buttons Cytoscape.NETWORK_MODIFIED - update UI buttons JTable Model changed - update UI buttons

  Addition/removal of CyAttributes (MultiHashMap DataDefinitionListener) Cytoscape.SAVE_PLUGIN_STATE - save VC state with session Cytoscape.SESSION_SAVED - update VC state info Cytoscape.RESTORE_PLUGIN_STATE - read in saved VC info

  CytoscapeDesktop.NETWORK_VIEW_FOCUSED - track network for following selection events

  CytoscapeDesktop.NETWORK_VIEW_CREATED - track network for following selection events

Events Produced

• Various JTable model changed and structure changed events

  ColumnSelection VCTableChangeListener (internal event) - refresh heatstrips

AgilentLiteratureSearch

Events Consumed

• LitSearch.SearchFeedbackListener (present feedback during search)

  LitSearch.QueryResultsListener - output Cytoscape network

  LitSearch.QueryMatchesDisplayer - update match decorations

  LitSearch.QueryMatchesDeletionListener - update Cytoscape based on

  • user removing query matches.

  LitSearch.PauseListener - stop nested searches?

  LitSearch.SearchInProgressListener - stop nested searches?

  Swing PopupMenus and regular menus

  PropertyChangeListener - Close window monitor

  CytoscapeAction - the various actions that ALS defined (e.g., GatherEvidence)

  CytoscapeDesktop.NETWORK_VIEW_FOCUSED - track network to following selection events

  CytoscapeDesktop.NETWORK_VIEW_CREATED - track network to following selection events

  GraphViewChangeEvent.EDGES_SELECTED_TYPE - menu item enable/disable

  GraphViewChangeEvent.NODES_SELECTED_TYPE - menu item enable/disable

  GraphViewChangeEvent.EDGES_UNSELECTED_TYPE - menu item enable/disable

  GraphViewChangeEvent.NODES_UNSELECTED_TYPE - menu item enable/disable

  ding.view.NodeContextMenuListener - popup menu

  ding.view.EdgeContextMenuListener - popup menu

  giny.model.GraphPerspectiveChangeListener - propagate Cytoscape

  • network changes to the parallel ALFA network, keep

    TextSourceInfo objects up-to-date.

  Cytosacpe.PROXY_MODIFIED - update ALS proxy info

  Cytoscape.NETWORK_CREATED - monitor GraphPerspective events on networks

  Cytoscape.NETWORK_DESTROYED - unmonitor GraphPerspective events on networks

  Cytoscape.SESSION_LOADED - add new TextSourceInfo objects

  CytoscapeDesktop.NETWORK_VIEW_CREATED - track graph view change events

  CytoscapeDesktop.NETWORK_VIEW_DESTROYED - untrack graph view change events

  MultiHashMapDefinitionListener - manage TextSourceInfo objects on attributes

Events Produced

• ALSInitListener (internal event) Cytoscape.PREFERENCES_UPDATED

HyperEdge

Events Consumed

• Cytoscape.SESSION_LOADED - track changes to HyperEdges

  Cytoscape.NETWORK_LOADED - track changes to HyperEdges

  Cytoscape.NETWORK_CREATED - track changes to HyperEdges

  Cytoscape.NETWORK_DESTROYED - track changes to HyperEdges

  Cytoscape.NETWORK_MODIFIED - track changes to HyperEdges

  giny.model.GraphPerspectiveChangeListener - update HyperEdges based on Edge/Node changes

Events Produced

• DeleteListener

  NewObjectListener

  ChangeListener