Cytoscape Wiki
UI Test Cases for File Menu - Import sub menu
Preconditions |
Test Case ID |
Instructions |
Expected Results |
Windows |
Mac |
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Date Executed |
Pass/Fail |
Date Executed |
Pass/Fail |
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1. Start Cytoscape 2. Import a network file (eg. galFiltered.sif) 3. Click on File from the toolbar |
FM9.1 |
1. Select Import → Network (multiple file types)… 2. Choose the galFiltered.xgmml file from the sampelData directory and click Import |
A new version of the galFiltered network should appear in a different window |
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May 20th 09 |
P |
FM9.2 |
Import Network from Table (Text/MS Excel) is covered under the Import_TestCasesTable_2.6 core plugin |
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FM9.3 |
Import Network from web services under construction |
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FM9.4 |
Importing node attributes is covered under the Node Attribute Browser_2.6 core plugin test cases |
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FM9.5 |
Importing Attributes from Table (Text/MS Excel) is covered under the Browser Core Plugins Test Cases |
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FM9.6 |
Importing edge attributes is covered under the Edge Attribute Browser_2.6 core plugin test cases |
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FM9.7 |
1. Select Import → Ontology and Annotation… 2. Select Gene Association File for Saccharomyces cerevisiae from the Annotation menu and leave the default setting for Ontology 3. Select one of the galFiltered networks and click on Go common Name from the Node Attribute Browser Select Attributes menu |
Cytoscape should show a large network under the Networks tab in the Control Panel (view not created due to size) and there should be new attributes available for selection in the Node Attribute Browser |
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May 20th 09 |
P |
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FM9.8 |
Importing an Attribute Expression Matrix is covered under the Node Attribute Browser_2.6 core plugin test cases |
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FM9.9 |
1. Select Import → Vizmap Property File… 2. Choose sampleStyles.props from the sampleData directory and click Open |
All the nodes in the galFiltered network should be light gray with no border and each edge should be a black line labelled with the type of interaction that it represents |
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May 20th 09 |
F |
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FM9.10 |
1. Select Import → Import Attributes from NCBI Entrez Gene… 2. Click Import 3. Select one of the galFiltered networks and click on EntrezGene ID from the Node Attribute Browser Select Attributes menu |
New attributes should be available for selection under the Node Attribute Browser including EntrezGene ID |
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May 20th 09 |
P |
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FM9.11 |
1. Select Import → Import Attributes from Biomart… 2. Select ENSEMBL 54 GENES (SANGER UK) – Saccharomyces cerevisiae genes (SGD1.01) from the Data Source menu and GO ID(s) from the Data Type menu 3. Click the check box on the top of the list of available attributes and click Import 4. Select one of the galFiltered networks and click on the new attribute from the Node Attribute Browser Select Attributes menu |
New attributes should be available for selection under the Node Attribute Browser |
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May 20th 09 |
P |
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