Cytoscape Wiki
New File Menu
In 2.3, the File munu will be re-organized for new features including session saving and XGMML writer. The default save action will be session saving, and other menus will be moved to export menu.
Save Menu
- Save session (Overwrite file)
- Save session as...
- Save current network as XGMML
Load Menu
- Load session
- Load XGMML Network File
- Load sif file
- Load annotation
Export Menu
Currently, Export menu is used for exporting graphics. In 2.3, this will be reorganized as follows:
- Export Network as graphics
- Export network as...
- sif file
- sif with annotation (Rowan's format)
Transform Network with [http://www.w3.org/Style/XSL/ XSL]
By adding XSL transformer, users and developers can transform network files into all kinds of file formats (for example, HTML). Sample XSL files will be provided.