Cytoscape Wiki|
← Revision 2 as of 2005-12-09 02:10:01
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← Revision 3 as of 2006-01-12 17:58:40 →
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| Deletions are marked like this. | Additions are marked like this. |
| Line 5: | Line 5: |
| * Save session (Overwrite file) | * Save session (Overwrite file, CTL-S) |
| Line 10: | Line 10: |
| * Load session | * Open session (CTL-O) |
| Line 14: | Line 14: |
| * Load Expression Matrix |
New File Menu
In 2.3, the File munu will be re-organized for new features including session saving and XGMML writer. The default save action will be session saving, and other menus will be moved to export menu.
Save Menu
- Save session (Overwrite file, CTL-S)
- Save session as...
- Save current network as XGMML
Load Menu
- Open session (CTL-O)
- Load XGMML Network File
- Load sif file
- Load annotation
- Load Expression Matrix
Export Menu
Currently, Export menu is used for exporting graphics. In 2.3, this will be reorganized as follows:
- Export Network as graphics
- Export network as...
- sif file
- sif with annotation (Rowan's format)
Transform Network with [http://www.w3.org/Style/XSL/ XSL]
By adding XSL transformer, users and developers can transform network files into all kinds of file formats (for example, HTML). Sample XSL files will be provided.