Use Case Name : ../TranscriptionShorthand

For Feature : MIMEditor

Editors: DavidKane

TableOfContents([2])

Summary

A user wants to describe the possibility a protein is transcribed, without showing in detail, all of the mechanisms.

Step-by-Step User Action

  1. User specifies a protein to transcribe

  2. User specifies a ../DnaSite

  3. User specieis that there is a ../TranscriptionShorthand relationship between the two

  4. User optionally specifies the evidence for this reaction

Visual Aides

The symbol for ../TranscriptionShorthand is simular to ../ProductAppears, except that there is always a right angle in the edge, and it is always between a DNA site and a protein:

attachment:transcriptionshorthand1_061120_dwk.PNG

An example in context follows:

attachment:transcriptionshorthand2_061120_dwk.PNG

Requirements for Cytoscape

TBD

Importance

TBD

Other Examples

Comments

Shared ../MimEditorUseCaseComments

BioPax representation TBD

PageComment2

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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