| ← Revision 1 as of 2006-11-20 16:27:17 → Size: 2370 Comment:  | Size: 2685 Comment: Updated importance | 
| Deletions are marked like this. | Additions are marked like this. | 
| Line 35: | Line 35: | 
| attachment:productsappears1_061117_dwk.PNG The product that appears is on the right side of the arrow: attachment:productsappears2_061117_dwk.PNG Here is an example, in context: attachment:productsappears3_061117_dwk.PNG | |
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| This notation most often appears in explicit maps. ..//TranscriptionShorthand is a special case of this notation. | This is generally important, and the notation most often appears in explicit maps.  ../TranscriptionShorthand is a special case of this notation. attachment:productsappears4_061117_dwk.PNG | 
| Use Case Name : ../ProductAppears | 
| For Feature : MIMEditor | 
| Editors: DavidKane | 
Summary
Users wants to describe a species in a pathway without complete detail to its origins
Step-by-Step User Action
- User specifies a protein or small molecule
- User specifies a product appears relationship
- User optionally specifies the evidence for this reaction
Visual Aides
The notation for this relationship is the following:
attachment:productsappears1_061117_dwk.PNG
The product that appears is on the right side of the arrow:
attachment:productsappears2_061117_dwk.PNG
Here is an example, in context:
attachment:productsappears3_061117_dwk.PNG
Requirements for Cytoscape
TBD
Importance
This is generally important, and the notation most often appears in explicit maps. ../TranscriptionShorthand is a special case of this notation.
attachment:productsappears4_061117_dwk.PNG
Other Examples
 Cytoscape Wiki
 Cytoscape Wiki