Cytoscape Wiki|
← Revision 1 as of 2009-08-24 18:23:51
Size: 87
Comment:
|
← Revision 2 as of 2009-09-28 20:05:12 →
Size: 555
Comment:
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 1: | Line 1: |
|
= Support for Modules in Cytoscape = == Introduction == In many cases, biologists are interested in relationship between functional modules first. Then, they look into the details inside the modules, i.e., actual interactions. Cytoscape can partially handle this problem using Group API and some related plugins, == Usecases == == Implementation == === File Formats === Most of popular XML graph file formats support hierarchical structure. ==== DOT ==== ==== |
|
| Line 2: | Line 18: |
|
= Introduction = |
Support for Modules in Cytoscape
Introduction
In many cases, biologists are interested in relationship between functional modules first. Then, they look into the details inside the modules, i.e., actual interactions. Cytoscape can partially handle this problem using Group API and some related plugins,
Usecases
Implementation
File Formats
Most of popular XML graph file formats support hierarchical structure.
DOT
====