Hackathon2005 - Cytoscape Wiki

Discuss the difference between node hide and delete concepts -> Goal: get conceptual clarity and a plan to document/implement any necessary changes based on this
Improve conceptual clarity and better document the core and graph model - Is the root graph a multigraph or a graph? Is the root graph directed, undirected or mixed? How about graph perspective? Can nodes or edges be duplicated? etc.
Discuss switching to a numbered node system instead of the current node ID as a string system
Discussion of undo manager
Prioritize subsystems for refactoring
Discuss new documentation options e.g. wiki based, which can be translated to PDF and Java help.
Please add your discussion points here.