Compatibility

This page summarizes the platforms Cytoscape 3 has been tested on and any workarounds that need to be done to get it to install and launch.

OS

JDK/JRE

Compatible?

Last Tested

Notes

Mac OS 10.8.1

Apple JDK 1.6.0_33

Yes

6-Sep-2013

1, 2

Oracle JDK SE 7u7

1, 2

Mac OS 10.7

Apple JDK 1.6.0_33

1

Oracle JDK SE 7u7

1

Mac OS 10.6

1

Mac OS 10.5

1

Windows 8 64-bit

JRE 1.7.0_05

Yes

6-Sep-2013

1

Windows 8 32-bit

1

Windows 7 64-bit

JRE 1.7.0_02

Yes

6-Sep-2013

1

Windows 7 32-bit

1

Ubuntu Desktop 12.04 LTS amd64

Oracle JDK SE 7u7

1

Ubuntu Desktop 11.10 amd64

Oracle JDK SE 7u7

1

  1. Haven't tested installer on this platform yet.
  2. The default Gatekeeper settings cause an error saying the DMG is damaged. We need to sign our installer DMG somehow to avoid this. Users can work around this by disabling Gatekeeper temporarily (System Preferences → Security & Privacy → Allow applications downloaded from → Anywhere)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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