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|| W || move up ||
|| A || move left ||
|| S || move down ||
|| D || move right ||
|| E || move forward ||
|| Q || move backward ||
|| W || Move up ||
|| A || Move left ||
|| S || Move down ||
|| D || Move right ||
|| E || Move forward ||
|| Q || Move backward ||

Rotation:

|| Z || Roll camera clockwise ||
|| X || Roll camera counter-clockwise ||
|| Shift + Up/Down || Rotate about X-Axis ||
|| Shift + Left/Right || Rotate about Y-Axis ||

Bird's eye view:
 * Under the Network tab to the left, click or drag the mouse on the bird's eye view to move the main camera

=== Network Manipulation Controls ===

Selection:
 * Drag the mouse to select objects, or click on nodes to select them.

Node, edge addition and removal:
|| N || Creates a new node under the mouse cursor ||
|| J || Creates a new edge between currently selected nodes and the node currently under the mouse cursor

Node dragging:
 * Hold CTRL and drag the mouse to move currently selected nodes.
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v0.5: Initial release v0.5: Initial beta release

3D Renderer

This is a plugin for Cytoscape 3 that attempts to render networks in 3D and integrate itself with VizMapper. Currently, it is still under development.

Current Features

  • Camera movement, rotation
  • Bird's eye view that can be clicked on to navigate the main camera
  • Node and edge manipulation (node dragging, selection, addition, removal)
  • Basic node shapes (spheres, cubes, tetrahedrons)
  • Node label text rendering

Download

(Link coming soon)

Camera Controls

Movement:

W

Move up

A

Move left

S

Move down

D

Move right

E

Move forward

Q

Move backward

Rotation:

Z

Roll camera clockwise

X

Roll camera counter-clockwise

Shift + Up/Down

Rotate about X-Axis

Shift + Left/Right

Rotate about Y-Axis

Bird's eye view:

  • Under the Network tab to the left, click or drag the mouse on the bird's eye view to move the main camera

Network Manipulation Controls

Selection:

  • Drag the mouse to select objects, or click on nodes to select them.

Node, edge addition and removal:

N

Creates a new node under the mouse cursor

|| J || Creates a new edge between currently selected nodes and the node currently under the mouse cursor

Node dragging:

  • Hold CTRL and drag the mouse to move currently selected nodes.

Currently Supported Visual Properties

Nodes:

  • Node fill color
  • Node shape
  • Node label

Edges:

  • Edge fill color

Planned Features

  • More complete set of supported visual properties
  • Integration with VizMapper's default style previewer/editor

Version History

January 24, 2012

v0.5: Initial beta release

Cytoscape_3/3D_Renderer (last edited 2012-03-29 21:34:52 by 192)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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