RoadMap2006

Brainstorm of Topics

UCSF

• Layout Manager / Broker - Scooter - 2.5

• Remove Deprecation Warnings - Scooter - 2.5, ongoing

• Groups (formerly known as metanodes) - UCSF, Agilent - 2.5

Agilent

• Hyperedges - Aglient - 2.5

• Document Event Handling - Mike Creech, Allan K, Ben Gross (write Doclets)

UCSD

• Vizmap Redesign UI - UCSD - 2.6

• Linkout from Attribute Browser - Kei - 2.5

• Plugin Website - UCSD - 2.5+

• Memory Mgt - Mike Smoot - 2.5

• GINY Refactoring - Chief Architect - Mike Smoot - beyond

• Properties / XML Config - Kei, Scooter - 2.5

• Automatic Plugin Import - UCSD, Sarah - 2.5

• Vizmap API - Mike Smoot, Sarah - 2.6

MSKCC

• Cytoscape Calss Cleanup - Ethan - 2.5

• CyAttributes Name Clashes - Ethan - 2.5

• Pathway Commons Connectivity - MSKCC, Gary - (website 2.5)

• Filters - Ethan, Mike Smoot - 2.5

• Combining Attributes / Formulas - Ethan, Scooter, Alex - 2.6

ISB

• Library Reduction / Cleanup - Sarah - 2.5

• Web Services / Database Connectivity Guidelines - Sarah, Alex - 2.5

Pasteur

• Usability Assessment - Pasteur, Sarah, M. X - ongoing

Piet, AMC

• Performance Profiling - Piet - ongoing

• Testing - Piet, Tero - 2.5

• Undo Manager - Piet, Peng - ongoing

Collective Leadership

• Interactive Layout (Bubble, Snap-To) - Alex, Allan K, Ben - 2.5

• Layers / Annotation / UI for cutsom nodes - Alex, Allan K, Ben - 2.5

• Custom Node / Edge Graphics - MIM?, UCSF, Allan K, Ben - 2.6

• Papers - All - ongoing

Unassigned

• Tutorials - Outreach Officer

• Website Content Update - Webmaster

Overall Themes

1. Pathway / Annnotation
2. Usability
3. Navigation / Find

Cytoscape Offices

• Chief Architect = Mike Smoot

• Outreach Officer = back to the board, possible split up the tasks

• Webmaster = ...anyone?... Gary can offer some restructuring