R2 and Cytoscape: Inferring gene targets by graph based integration and analysis of molecular biological data

Piet Molenaar

Academic Medical Center, University of Amsterdam, the Netherlands

Recipe

Plugins to Load: Network and Attribute I/O, Network Inference, Functional Enrichment

Data Files: Use the notch timeseries (Piet: refine this)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

R2InferGeneTargetsRecipe