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Revision 2 as of 2010-11-04 16:46:12
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Editor: GaryBader
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  * We should create an acceptance test suite to help us know if cyto3 is ready e.g. select 100,000 edges using the filters API and see how fast it is. This could be used to test Cytoscape from release to release.
  
  • Place and time TBD, probably California in early 2011
  • Focus: Get feedback on Cytoscape 3.0 alpha developer pre-release and continue API design.
  • Agenda
    • Need a concept of how to link/join tables to networks and how these are synchronized (e.g. how selection state is synchronized - do we need a CyTable that can't be unlinked from a CyNetwork that stores e.g. selection state and then enable developers to link additional data tables as local tables for that network? This would set up a one to many relationship between networks and tables) - added Oct.2010

    • Filter API - added Oct.2010
    • CyTable views - added Oct.2010

    • How nested networks, subnetworks, groups, metanodes, compound graphs all play well together - added Oct.2010
    • We should create an acceptance test suite to help us know if cyto3 is ready e.g. select 100,000 edges using the filters API and see how fast it is. This could be used to test Cytoscape from release to release.

Outdated_Cytoscape_3.0/Mini_Retreat2 (last edited 2011-03-12 22:14:55 by ScooterMorris)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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