## page was renamed from Cytoscape_3.0/Enhanced Test Plan/Core Plugins Testcases/Node Attribute Browser
## page was renamed from Node Attribute Browser
== 2.1 Node Attribute Browser Test Cases ==
||<|2> '''Preconditions'''||<|2> '''Test Case ID'''||<|2> '''Instructions'''||<|2> '''Expected Results'''||<-2> '''Windows'''||<-2> '''Mac'''||
||'''Date Executed'''||'''Pass/Fail'''||'''Date Executed'''||'''Pass/Fail'''||
||<|19> 1. Start Cytoscape <
>2. Import a network file (e.g. galFiltered.sif) and attributes from table. (e.g. galGeneNames.csv After selecting the file, don't forget to check "Comma" and "Transfer first line as attribute names" under "Show Text File Import Options") <
>3. Select the Node Attribute Browser tab||B2.1.1||1. Click Select Attributes <
>2. Check the appropriate attribute boxes e.g. cannonicalName||A new column for the attribute should appear in the panel|| || || || ||
||B2.1.2||Select a node and then select another node while in the Node Attribute Browser||Attributes should change to those for each specific node|| || || || ||
||B2.1.3||Drag and select multiple nodes||Nodes should be highlighted and their attributes listed|| || || || ||
||B2.1.4||Click one of the attributes of a node with multiple nodes selected||The selected attribute should have a different background and the node a new highlight colour|| || || || ||
||B2.1.5||1. Select a node <
>2. Double click on the text under one of the attribute columns <
>3. Edit the text of e.g. "!GeneName" by changing the capitalisation then press enter||The Browser should reflect the text changes and they should persist even if the node is unselected and then reselected|| || || || ||
||B2.1.6||1. Drag and select several nodes (say 5) <
>2. Click create a new (string) attribute and call it "Names" <
>3. Click on the Attribute batch editor and select the Copy tab, select "!GeneName" from the Copy From menu and "Names" from the To menu <
>4. Click GO||The contents of the Copy From cells should now appear in the new attribute column "Names"|| || || || ||
||B2.1.7||1. Select the Clear tab from the Attribute batch editor box <
>2. Choose Names as the attribute column <
>3. Click GO||The Browser should reflect the changes by showing no entries in the Names column|| || || || ||
||B2.1.8||1. Select the Operation tab from the Node Attribute Batch Editor <
>2. Choose Set from the operation menu and choose the Names attribute as the column to edit <
>3. Type “Galactose Metabolism” into the text field and click GO||The Names attribute column should contain “Galactose Metabolism” for all the selected nodes|| || || || ||
||B2.1.9||1. Repeat step 1 from B2.1.8 <
>2. Choose Replace from the operation menu and choose the Names attribute as the column to edit <
>3. Type “Galactose Transport” into the text field and click GO||The Names attribute column should contain “Galactose Transport” for all the selected nodes|| || || || ||
||B2.1.10||1. Repeat step 1 from B2.1.8 <
>2. Choose To upper-case from the operation menu and choose the Names attribute as the column to edit <
>3. Click GO||The Names attribute column should contain “GALACTOSE TRANSPORT” or the text in the column should be all capitals|| || || || ||
||B2.1.11||1. Repeat step 1 from B2.1.8 <
>2. Choose To lower-case from the operation menu and choose the Names attribute as the column to edit||The Names attribute column should contain “galactose transport” or the text in the column should all be lower case|| || || || ||
||B2.1.12||1. Repeat step 1 from B2.1.8 <
>2. Choose Add Prefix from the operation menu and choose the Names attribute as the column to edit <
>3. Type “Yeast-“ into the text field and click GO||The Names attribute column should contain “Yeast-galactose transport” or the text in the column should be preceded by “Yeast-“|| || || || ||
||B2.1.13||1. Repeat step 1 from B2.1.8 <
>2. Choose Add Suffix from the operation menu and choose the Names attribute as the column to edit <
>3. Type “-intracellular” into the text field and click GO||The Names attribute column should contain “Yeast-galactose transport-intracellular” or the text in the column should be followed by “-intracellular”|| || || || ||
||B2.1.14||1. Click create a new (Integer) attribute and call it Numbers <
>2. Repeat step 1 from B2.1.8 <
>3. Choose Set from the operation menu and choose the Numbers attribute as the column to edit <
>4. Type “2” into the text field and click GO||The Numbers attribute column should contain “2”|| || || || ||
||B2.1.15||1. Repeat step 1 from B2.1.8 <
>2. Choose Add Number from the operation menu and choose the Numbers attribute as the column to edit <
>3. Type “2” into the text field and click GO||The Numbers attribute column should contain “4”|| || || || ||
||B2.1.16||1. Repeat step 1 from B2.1.8 <
>2. Choose Mul from the operation menu and choose the Numbers attribute as the column to edit <
>3. Type “2” into the text field and click GO||The Numbers attribute column should contain “8”|| || || || ||
||B2.1.17||1. Repeat step 1 from B2.1.8 <
>2. Choose Div from the operation menu and choose the Numbers attribute as the column to edit <
>3. Type “4” into the text field and click GO||The Numbers attribute column should contain “2"|| || || || ||
||B2.1.18||1. Click the Import attributes from file icon in the Browser <
>2. Choose a node attribute file to import (eg. galFiltered.nodeAttrs1) and click Open <
>3. Click Select Attributes and click on the check box for the name of the newly imported attribute (eg. Test``Node``Attribute1)||Each node selected should display either a 1, 2 or 3 in the Test``Node``Attribute1 column|| || || || ||
||B2.1.19||1. Click the Import Expression Matrix icon in the Browser <
>2. Choose an expression matrix file (eg. galExpData.pvals) and click Open (leave the default setting of Apply nodes using ID) <
>3. Click Select Attributes and click on the check boxes||Each node selected should display expression values in the Xexp columns and p values in the Xsig columns (where X is the name of the experiment)|| || || || ||