## page was renamed from Cytoscape_3.0/Eclipse/PaxIntegration
= Using Pax-Construct from Eclipse =

== Introduction ==
[[http://www.ops4j.org/projects/pax/construct/|Pax-Construct]] is a usuful tool for OSGi-based system development and it is available as a [[http://www.ops4j.org/projects/pax/construct/maven-pax-plugin/index.html|Maven plugin]].  You can use most of its features from Eclipse once you install m2eclipse plugin.

== How to use ==
=== Setup ===
You need to install m2eclipse plugin to run PAX commands.

=== Execute Pax Goals ===
==== Provisioning ====
Instead of running Cytoscape 3 on Equinox, you can use '''''pax:provision''''' goal to run Cytoscape 3 on [[http://felix.apache.org/site/index.html|Apache Felix]].

 1. From '''''Run''''' menu, select '''''Run Configurations...'''''
 1. Select '''''Maven Build''''' and create new configuration.
 1. Set base directory to ''core''.
 1. Select following goals, in order:
  * clean
  * install
  * pax:provision

  {{attachment:pax1.png}}
 
 Any combination of the goals should work.  The example here is equivalent to type the following command in the treminal:
 {{{
mvn clean install pax:provision
 }}}
 1. Apply and Run

== Reference ==
 * [[http://www.ops4j.org/projects/pax/construct/maven-pax-plugin/eclipse-mojo.html|pax:eclipse parameters]]

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This document is written by KeiichiroOno <<DateTime>>

If you have any questions, please e-mail me (kono at ucsd dot edu)