Running and Developing Cytoscape 3 on Eclipse

Introduction

This is a tutorial document to learn how to run and develop Cytoscape 3 on Eclipse's OSGi Runtime (Equinox)

Requirments

Procedure

  1. Start Eclipse.

  2. Checkout Cytoscape 3 from the current SVN trunk: http://chianti.ucsd.edu/svn/cytoscape3/trunk/

  3. Quit Eclipse

  4. From command line, run mvn pax:eclipse. This command generates eclipse project files.

  5. Start Eclipse again

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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