← Revision 1 as of 2006-11-20 16:27:17
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attachment:productsappears1_061117_dwk.PNG The product that appears is on the right side of the arrow: attachment:productsappears2_061117_dwk.PNG Here is an example, in context: attachment:productsappears3_061117_dwk.PNG |
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Use Case Name : ../ProductAppears |
For Feature : MIMEditor |
Editors: DavidKane |
Summary
Users wants to describe a species in a pathway without complete detail to its origins
Step-by-Step User Action
- User specifies a protein or small molecule
- User specifies a product appears relationship
- User optionally specifies the evidence for this reaction
Visual Aides
The notation for this relationship is the following:
attachment:productsappears1_061117_dwk.PNG
The product that appears is on the right side of the arrow: attachment:productsappears2_061117_dwk.PNG
Here is an example, in context: attachment:productsappears3_061117_dwk.PNG
Requirements for Cytoscape
TBD
Importance
This notation most often appears in explicit maps. ..//TranscriptionShorthand is a special case of this notation.
attachment:productsappears4_061117_dwk.PNG
Other Examples