'''Title: MCODE - Molecular Complex Detection plugin'''

Abstract:
{{{
MCODE finds clusters (highly interconnected regions) in a network. Clusters mean different things in different types of networks. For instance, clusters in a protein-protein interaction network are often protein complexes and parts of pathways, while clusters in a protein similarity network represent protein families.  This presentation will introduce MCODE and discuss new features that are under development.
}}}

Data keywords: protein-protein interaction, protein-dna interaction, genetic interaction, protein similarity network

Cytoscape keywords: network clustering algorithm


== Publications ==

{{{
Bader GD, Hogue CW
An automated method for finding molecular complexes in large protein interaction 
networks
BMC Bioinformatics. 2003 Jan 13;4:2. Epub 2003 Jan 13
}}}
http://www.biomedcentral.com/1471-2105/4/2