== GraphMerge Core Plugin Test Cases ==

|| '''Preconditions'''|| '''Test Case ID'''||'''Instructions'''||'''Expected Results'''|| '''Date Executed'''||'''Pass/Fail'''||
||<|3> 1. Start Cytoscape <<BR>>2. Import two network files: (eg. galFiltered.sif and BINDyeast.sif) <<BR>>3. Click on Plugins and select Advanced Network Merge <<BR>>4. Select each network from the available networks box and then click the right arrow to move them to the selected networks box. <<BR>>5. Click OK to merge the selected networks (Note: with large networks Cytoscape may not automatically create a graphical view, so click on the Edit menu with the network highlighted and click on Create View)||GM1||Before precondition step 5 select the Union operation||A new graph should be created displaying the merged networks (If this does not happen see preconditions Note)|| || ||
||GM2||Before precondition step 5 select the Intersection operation||A new graph should be created displaying the common nodes from the two networks|| || ||
||GM3||Before precondition step 5 select the Difference operation (order matters)||A new graph should be created displaying the parts of the first network that are not in the second network|| || ||

== LinkOut Core Plugin Test Cases ==

|| '''Preconditions'''|| '''Test Case ID'''||'''Instructions'''||'''Expected Results'''|| '''Date Executed'''||'''Pass/Fail'''||
||<|3> 1. Start Cytoscape <<BR>>2. Import a network file (eg. galFiltered.sif)||LO1||1. Right click on a node and select Link``Out from the right-click menu <<BR>>2. Select Reactome → ReactomeID||The link should open the web page www.reactome.org|| || ||
||LO2||1. Right click on a node and select Link``Out from the right-click menu <<BR>>2. Select Entrez → Protein||The link should open the web page www.ncbi.nlm.nih.gov|| || ||
||LO3||1. Right click on a node and select Link``Out from the right-click menu <<BR>>2. Select  iHOP → yeast||The link should open the web page www.ihop-net.org|| || ||


== ManualLayout Core Plugin Test Cases ==
|| '''Preconditions'''|| '''Test Case ID'''||'''Instructions'''||'''Expected Results'''|| '''Date Executed'''||'''Pass/Fail'''||
|| 1. Start Cytoscape <<BR>>2. Import a network file (eg. galFiltered.sif)||ML1||Select a node on the graph and drag it to a new position and then drop it||The node selected should be highlighted and the user should be able to move it around, the edges connected moving with it|| || ||



== PSI-MI Core Plugin Test Cases ==



|| '''Preconditions'''|| '''Test Case ID'''||'''Instructions'''||'''Expected Results'''|| '''Date Executed'''||'''Pass/Fail'''||
||1. Start Cytoscape <<BR>>2. Import a network file (eg. [[attachment:Sample1.xml]]++)||P1|| ||The graph produced should contain only 6 nodes and 8 edges|| || ||
++File from: Kerrien S et al (2007) Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions. ''BMC Biol'' '''5''':44.