Differences between revisions 13 and 27 (spanning 14 versions)
Revision 13 as of 2005-10-02 22:23:08
Size: 604
Editor: p54854764
Comment:
Revision 27 as of 2009-02-12 01:03:38
Size: 975
Editor: localhost
Comment: converted to 1.6 markup
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
The Cytoscape user manual exists as a Microsoft Word file in: = Overview =
Line 3: Line 3:
{{{
cytoscape\user_docs
}}}
The Cytoscape user manual exists as a wiki page: [[Cytoscape 2.3 User Manual]]
Line 7: Line 5:
To modify the manual, edit the document in Microsoft Word and check it back in to CVS. Someone (maybe it will be you!) will create a PDF from this Word document near release time for distribution. When editing the manual, please use GIF or PNG files for all screenshots. Do not use JPG, as this is a lossy file format.
Line 9: Line 7:
It would be nice to have a more cross-platform and manageable solution to user documentation. Mike Smoot suggested DocBook, though as of late 2005, it appears not to have a GUI editor, which is definitely a requirement for us. If you are aware of other options, let us know. When creating a manual for a new version, the manual from the pervious version should be copied to a new page. This is so we can keep old versions of the manual for those using older versions of Cytoscape.
Line 11: Line 9:
["/DocBook GUI editor"] During the release process, the page will be automatically converted to DocBook format and then to various other formats, like PDF and Java Help

= Style Guide =

 * Try not to use underlines. Underlines generally indicate hyperlinks, and using underlines w/o such hyperlinks tends to confuse the user. Use bold instead.
 * To describe user menu actions, use the following template: '''File → Import → Network'''.
 * Resize images to a max width of 600 pixels. The images should not be so big as to overhwelm the reader.

Overview

The Cytoscape user manual exists as a wiki page: Cytoscape 2.3 User Manual

When editing the manual, please use GIF or PNG files for all screenshots. Do not use JPG, as this is a lossy file format.

When creating a manual for a new version, the manual from the pervious version should be copied to a new page. This is so we can keep old versions of the manual for those using older versions of Cytoscape.

During the release process, the page will be automatically converted to DocBook format and then to various other formats, like PDF and Java Help

Style Guide

  • Try not to use underlines. Underlines generally indicate hyperlinks, and using underlines w/o such hyperlinks tends to confuse the user. Use bold instead.
  • To describe user menu actions, use the following template: File → Import → Network.

  • Resize images to a max width of 600 pixels. The images should not be so big as to overhwelm the reader.

How_to_update_the_Cytoscape_manual (last edited 2009-02-12 01:03:38 by localhost)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

MoinMoin Appliance - Powered by TurnKey Linux