Current state of DanielAbel's GSoC project.
Progress can also be tracked on the blog. Or not. apparently I am not a blogging type of guy.
For detailed description, etc., see the original project proposal at DanielAbel/GoogleSummerofCode2008.
The edge-directionality part of the project is ready (in the sense that I consider it finished, but it still needs review and maybe modification). See DanielAbel/EdgeDirectionality for details
My ideas and plans about supporting pluggable (node, edge) renderers are at DanielAbel/PluggableRenderers.
svn branches
I will create feature branches in svn+ssh://grenache.ucsd.edu/cellar/common/svn/cytoscape3/branches/abeld-gsoc
in-development branches will be in dev/ while review-ready ones in review/
currently I have only one branch, for the edge directionality feature at:
svn+ssh://grenache.ucsd.edu/cellar/common/svn/cytoscape3/branches/abeld-gsoc/dev/edge-directionality
TODO list
next steps to do:
- directedness in xgmml file format
- directedness related gui changes
Milestones
- (done) set up svn branches, eclipse, etc. (sometime before Maj. 26.)
- (done) Maj. 28.: edge directionality unittests
- (done, except xgmml-related) Maj. 30.: backend code needed for unittests to pass:
(done) Jun. 6.: gui/plugins part of undirected edges (vizmapper, TableImport, etc.) (as these are gui-related things, I might not be able to create unittests for them, just as the rest of cytoscape's gui functionality is not really tested)
- Jul. 14.: cytoscape retreat; proof-of-concept of pluggable renderers
- Jul. 14 - 19.: cytoscape retreat in Toronto (likely no work during this)
- July 20 - 27.: vacation in US, no work during this week
- Aug. 4.: backend implementation of local attributes (big Attribute storage refactor)
- Aug. 11.: gui fixes required for local attributes (end of GSoC coding period)
Implementation Plan
- write unittests
- merge changes from internal fork of earlier cytoscape
- for details, see text of proposal
Contact Info
Personal Schedules
- start coding on Maj. 26.
Jun. 23th to Jun. 27th: I will be attending the NetSci 2008 conference
- July 14th to 20th: cytoscape retreat in Toronto
- July 20th to 26th: visiting relatives in Washington DC (and thus I won't be working on GSoC during this week)