Cytoscape @version@ is the latest version of Cytoscape, which introduces a whole new architecture, developer API and set of user controls. Cytoscape 3.0 represents a major redesign from the ground up, toward the goal of provide a stable, extensible, high-performance platform for network visualization and analysis. The initial Beta Release will introduce users to the new interfaces and features we've been working on:

As we roll out the initial Beta Release leading up to the first official release, we will be continuing to tweak and improve both the software and the documentation. Bear with us as the manual below is updated to reflect all the latest changes.

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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