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Cytoscape @version@ is the latest version of Cytoscape, which introduces a whole new architecture, developer API and set of user controls. Cytoscape 3.0 represents a major redesign from the ground up, toward the goal of provide a stable, extensible, high-performance platform for network visualization and analysis. The initial Beta Release will introduce users to the new interfaces and features we've been working on: Cytoscape @version@ is the latest version of Cytoscape, which introduces a whole new architecture, developer API and set of user controls. Cytoscape 3.0 represents a major redesign from the ground up, toward the goal of providing a stable, extensible, high-performance platform for network visualization and analysis.

''If you're new to Cytoscape (or would simply like to quickly get started using v3.0), skip to the '''Launching Cytoscape''' and '''Getting Started''' sections below.''

This release introduces users to new interfaces and features:
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As we roll out the initial Beta Release leading up to the first official release, we will be continuing to tweak and improve both the software and the documentation. Bear with us as the manual below is updated to reflect all the latest changes. In future releases, we will continue to tweak and improve both the software and the documentation. This manual will be updated to reflect all the latest changes.

Cytoscape @version@ is the latest version of Cytoscape, which introduces a whole new architecture, developer API and set of user controls. Cytoscape 3.0 represents a major redesign from the ground up, toward the goal of providing a stable, extensible, high-performance platform for network visualization and analysis.

If you're new to Cytoscape (or would simply like to quickly get started using v3.0), skip to the Launching Cytoscape and Getting Started sections below.

This release introduces users to new interfaces and features:

  • New welcome screen and toolbar for quick access to common actions
  • New Data Table controls to interface with your data
  • Integrated support for graphical annotations in networks
  • Support for independent sets of networks within a single session
  • Advanced network and table import controls
  • Improved architecture and API for a more stable experience

In future releases, we will continue to tweak and improve both the software and the documentation. This manual will be updated to reflect all the latest changes.

Cytoscape_3/UserManual/Introduction (last edited 2016-04-26 21:21:15 by bdemchak)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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