Cytoscape_3/Cy3TestPlan/misc

Preconditions

Test Case ID

Instructions

Expected Results

Date Executed

Pass/Fail

1. Start Cytoscape
2. Import a network file (eg. galFiltered.sif)

CE1

Click and drag a new node from the Editor tab and drop into an empty space on the graph

A new node should appear number sequentially according to the number of times a new node has been added

CE2

1. Click and drag a new directed edge and drop it on top of the new node created in the previous case
2. Click on an already existing node as the target for the interaction

A directed edge between the new node and the existing node should appear

CE3

1. Select the new node and edge alone by dragging a box around them
2. Right-click on the node and then click Delete selected nodes and edges

The selected edge and node should be deleted and no longer appear on the graph

Preconditions

Test Case ID

Instructions

Expected Results

Date Executed

Pass/Fail

1. Start Cytoscape
2. Import a network file (eg. galFiltered.sif)

LO1

1. Right click on a node and select LinkOut from the right-click menu
2. Select Reactome → ReactomeID

The link should open the web page www.reactome.org

LO2

1. Right click on a node and select LinkOut from the right-click menu
2. Select Entrez → Protein

The link should open the web page www.ncbi.nlm.nih.gov

LO3

1. Right click on a node and select LinkOut from the right-click menu
2. Select iHOP → yeast

The link should open the web page www.ihop-net.org

Preconditions

Test Case ID

Instructions

Expected Results

Date Executed

Pass/Fail

1. Start Cytoscape
2. Import a network file (eg. galFiltered.sif)

QF1.1

Enter text into the search field on the Tool bar and press Enter

If the search term is found it should be highlighted and zoomed the view panel should zoom in

QF1.2

With text in the search field click on the triangle tab at the end of the field

A list of similar terms to the text entered in the search field should appear

QF1.3

Enter irrelevant text into the search field

The field should be highlighted red and the drop down menu should display the search term followed by 0 hits

QF2.1

Select the Configure search options and then click cancel

The dialog box should disappear and settings should remain the same

QF2.2

1. Select the Configure search options, then click on the Node or Edge radio buttons and change the Selected attribute and click Apply
2. Enter text appropriate for the new search parameters

The search configuration box should disappear and the drop down menu should contain the corresponding style of suggestions to the search parameters. The term entered should highlight the object in the graph