== App Manager Test Plan ==

1. Initial install of core apps (empty CytoscapeConfiguration)
 * Start Cytoscape with empty CytoscapeConfiguration directory
 * Open App Manager
 * Verify that all core apps installed properly
 * Restart Cytoscape and verify again

2. Update core app
 * Start Cytoscape with available core app updates (use test App Store)
 * Open App Manager and check for updates
 * Install available updates
 * Verify that updates installed correctly
 * Restart Cytoscape and verify again

3. Uninstall core app update
 * Start Cytoscape with installed core app updates
 * Open App Manager
 * Uninstall update
 * Verify that update uninstalled correctly and old version restored
 * Restart Cytoscape and verify again

4. Install bundle app by App Manager
 * Start Cytoscape
 * Open App Manager
 * Install an app
 * Verify that it installed OK
 * Restart Cytoscape and verify again

5. Update bundle app
 * Start Cytoscape with available app updates
 * Open App Manager and check for updates
 * Install available updates
 * Verify that updates installed correctly
 * Restart Cytoscape and verify again

6. Uninstall bundle app
 * Start Cytoscape with installed app
 * Open App Manager
 * Uninstall app
 * Verify that app uninstalled correctly
 * Restart Cytoscape and verify again

7. Install bundle app by copy
 * Start Cytoscape
 * Copy an app to the installed directory
 * Verify that it installed OK
 * Restart Cytoscape and verify again

8. Uninstall bundle app by delete
 * Start Cytoscape
 * Delete an app from the installed directory
 * Verify that app uninstalled correctly
 * Restart Cytoscape and verify again

9. Install bundle app via App Store
 * Start Cytoscape 
 * Open App Store in browser
 * Install an app from the App Store page
 * Verify that the app installed correctly
 * Restart Cytoscape and verify again

10. Disable App in App Manager
 * Start Cytoscape
 * Open App Manager
 * Disable an app
 * Verify that the app disabled correctly
 * Restart Cytoscape and verify again

11. Enable App in App Manager
 * Start Cytoscape
 * Open App Manager
 * Enable an app
 * Verify that the app re-enabled correctly
 * Restart Cytoscape and verify again

12. Install simple app
 * Start Cytoscape
 * Open App Manager
 * Install a simple app
 * Verify that it installed OK
 * Restart Cytoscape and verify again

13. Update simple app
 * Start Cytoscape with available simple app updates
 * Open App Manager and check for updates
 * Install available updates
 * Verify that updates installed correctly
 * Restart Cytoscape and verify again

14. Disable Simple App
 * Start Cytoscape
 * Open App Manager
 * Disable simple app
 * Verify that the simple app disabled correctly
 * Restart Cytoscape and verify again

15. Enable Simple app
 * Start Cytoscape
 * Open App Manager
 * Enable simple app
 * Verify that the app re-enabled correctly
 * Restart Cytoscape and verify again

16. Uninstall Simple app
 * Start Cytoscape
 * Open App Manager
 * Uninstall simple app
 * Verify that the app uninstalled correctly
 * Restart Cytoscape and verify again

17. Install multiple versions
 * Start Cytoscape
 * Install an older version of an app using Install from File
 * Install a newer version of an app using Install from File
 * Verify that only newer version is installed
 * Reinstall the older version using Install from File
 * Verify that only older version is installed
 * Restart Cytoscape and verify again

18. Copy older and then newer version
 * Start Cytoscape
 * Copy an older version of an app to the installed directory
 * Copy a newer version of the same app to the installed directory
 * Verify that only newer version is installed
 * Restart Cytoscape and verify again

19. Copy newer and then older version
 * Start Cytoscape
 * Copy an newer version of an app to the installed directory
 * Copy a older version of the same app to the installed directory
 * Verify that newer version is still installed (and not older)
 * Restart Cytoscape and verify again

20. Upgrade app from App Store
 * Start Cytoscape
 * Go to App Store and bring up page for already-installed app with updates available
 * Click “Upgrade”
 * Verify that it installed OK
 * Restart Cytoscape and verify again

21. Rebuild based on symbolic link
 * Start Cytoscape with app symbolicly-linked from target directory
 * Verify app installed correctly
 * Rebuild app with no changes
 * Verify app still installed
 * Rebuild app with version number change
 * Verify app updated correctly.

22. Incompatible bundle app
 * Start Cytoscape
 * Install bundle app with incompatible update available in test App Store (i.e. one that depends on a newer Cytoscape - edit manifest to achieve this)
 * Try to install update via Update Manager
 * Try to install update with Install from File
 * Try to copy update (app should not load in any of the previous cases)
 * Restart Cytoscape and verify that old compatible app loaded/new incompatible app not loaded

23. Incompatible simple app
 * Start Cytoscape
 * Install simple app with incompatible update available with Install from File (i.e. one that depends on a newer Cytoscape - edit manifest to achieve this)
 * Try to copy update (app should not load in any of the previous cases)
 * Restart Cytoscape and verify that old compatible app loaded/new incompatible app not loaded