== UI Test Cases for Layout Menu - Main == ||'''Preconditions'''||'''Test Case ID'''||'''Instructions'''||'''Expected Results'''||'''Date Executed'''||'''Pass/Fail'''|| ||<|13> 1. Start Cytoscape <
>2. Import a network file (eg. galFiltered.gml) <
>3. Click on Layout from the toolbar||L1||1. Click Rotate <
>2. Drag the pointer along the number line representing degree||The Tool Panel should appear at the bottom of the Control Panel with the Rotate tab selected. The graph should rotate through the number of degrees indicated (To hide the Tool Panel click Layout → Rotate again)||Feb 22' 10 || P|| ||L2||1. Click Scale <
>2. Drag the pointer along the number line||The Tool Panel should appear at the bottom of the Control Panel with the Scale tab selected. The graph should change in size proportional to the number indicated. (To hide the Tool Panel click Layout → Scale again)||Feb 22' 10 ||P || ||L3||1. Click Align and Distribute <
>2. Drag and select some nodes <
>3. Select some of the buttons fro the Tool Panel||The Tool Panel should appear at the bottom of the Control Panel with the Align and Distribute tab selected. The buttons should arrange the nodes in various configurations. (To hide the Tool Panel click Layout → Align and Distribute again)||Feb 22' 10 || P|| ||L4||To avoid repetition the Settings… sub menu contents will be tested under the JGraph and Cytoscape Layouts sub menus|| || || || ||L5||yFiles Layouts are tested under the core plugins test cases|| || |||| ||L6.1||Select JGraph Layouts → Tree Layout||The nodes should be distributed in a branched arrangement||Feb 22' 10 || P|| ||L6.2||Select JGraph Layouts → Radial Tree Layout||The graph should appear with concentric ovals of nodes with angular arms on the outside|| Feb 22' 10|| P|| ||L6.3||Select JGraph Layouts → Simulated Annealing Layout|| ||Feb 22' 10 ||F; Ticket # 2193|| ||L6.4||Select JGraph Layouts → Circle Layout||All of the nodes are arranged at a locus equidistant from the centre of the circle||Feb 22' 10 ||P || ||L6.5||Select JGraph Layouts → Spring Embedded Layout||Similar to an Organic yFiles layout in appearance nodes overlap slightly, edges are short and the angles created by edges are minimized||Feb 22' 10 ||P || ||L6.6||Select JGraph Layouts → MOEN Layout|| || Feb 22' 10|| F; Ticket # 2193|| ||L6.7||Select JGraph Layouts → GEM Layout||The nodes with the most connected edges are further away from the nodes they are first neighbours with and most of the edges are directed in a 30° arc from each node|| ||P || ||L6.8||Select JGraph Layouts → Sugiyama Layout||This layout should be hierarchical with edges creating obtuse angles between nodes||Feb 22' 10 ||P || == UI Test Cases for Layout Menu - Cytoscape Layouts == ||'''Preconditions'''||'''Test Case ID'''||'''Instructions'''||'''Expected Results'''||'''Date Executed'''||'''Pass/Fail'''|| ||<|11> 1. Start Cytoscape <
>2. Import a network file (eg. galFiltered.gml) <
>3. Click on Layout from the toolbar||L7.1||Select Cytoscape Layouts → Inverted Self-Organising Map Layout||Nodes are clustered but not overlapping extensively. Edges are fairly long and angular with <90° angles|| Feb 23' 10||P || ||L7.2||Select Cytoscape Layouts → Edge-weighted Force directed (Bio``Layout) → (unweighted)||Edges are very long and nodes overlap. Network arranged in arrow or comet shape|| Feb 23' 10||P || ||L7.3||Select Cytoscape Layouts → Degree Sorted Circle Layout → All Nodes||The nodes of the main network are arranged at a locus equidistant from the centre of the circle and sorted numerically according to Degree starting at the bottom of the circle going clockwise|| Feb 23' 10||P || ||L7.4||Select Cytoscape Layouts → Grid Layout → All Nodes||The nodes should be arranged in an almost square grid|| Feb 23' 10||P || ||L7.5||Select Cytoscape Layouts → Attribute Circle Layout → canonicalName||The nodes of the main network are arranged at a locus equidistant from the centre of the circle and sorted alphabetically according to canonicalName starting at the bottom of the circle going anti-clockwise||Feb 23' 10 || P|| ||L7.6||Select Cytoscape Layouts → Circular Layout||Some of the nodes from the main network form a circle with branches off it|| Feb 23' 10||P || ||L7.7||Select Cytoscape Layouts → Group Attributes Layout → All Nodes → canonicalName||Nodes are arranged in a grid close to other nodes with similar canonicalName distributed alphanumerically|| Feb 23' 10||P || ||L7.8||Select Cytoscape Layouts → Force-Directed Layout → (unweighted)||Layout appears similar to Organic yFiles layout. Nodes and edges arranged to minimise force between them|| Feb 23' 10||P || ||L7.9||Select Cytoscape Layouts → Edge-weighted Spring Embedded → (unweighted)||Layout appears similar to Organic yFiles layout. Nodes and edges arranged to minimise force between them in an unweighted manner||Feb 23' 10 ||P || ||L7.10||Select Cytoscape Layouts → Spring Embedded → All Nodes||Layout appears similar to Organic yFiles layout. Nodes and edges arranged to minimise force between them|| Feb 23' 10||P || ||L7.11||Select Cytoscape Layouts → Hierarchical → All Nodes||The graph should resemble a family tree, many of the edges have more than one angled bend||Feb 23' 10 ||P ||