Cytoscape Wiki|
← Revision 6 as of 2007-01-25 17:24:15
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← Revision 7 as of 2007-02-01 16:55:54 →
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| = Release 2.5 Use Cases / Overall Themes = | = Release 2.5 Use Cases / Overall Themes = |
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| 1. Navigation / Find | 1. Navigation / Find |
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||'''Name'''||'''Lead Group'''||'''Time Required'''||'''Status'''|| ||Layout Manager / Broker||UCSF - Scooter|| || || ||Groups (formerly known as metanodes||UCSF, Agilent|| || || ||Hyperedges||Aglient|| || || ||Document Event Handling (write Doclets)||Everyone|| || || ||Remove Deprecation Warnings||Everyone||ongoing||ongoing|| ||["VizMapUI"] Redesign||UCSD - Kei|| || || ||Plugin Website / Automatic plugin download||UCSD - Peng, ISB - Sarah|| || || ||Linkout from Attribute Browser||UCSD - Kei|| || || ||Create cytoscape-helpdesk||UCSD - Peng|| || || ||Peformance (speed + memory) profiling||UCSD, AMC - Piet|| || || ||GINY Refactoring||UCSD - Mike|| || || ||Properties / XML Config||UCSD,UCSD - Scooter|| || || ||Cytoscape Class Cleanup||MSKCC - Ethan|| || || ||CyAttributes Name Clashes||MSKCC - Ethan|| || || ||Pathway Commons Connectivity||MSKCC, Gary|| || || ||Filters||MSKCC - Ethan, UCSD - Mike|| || || ||Combining Attributes / Formulas||MSKCC - Ethan, UCSF - Scooter, Alex|| || || ||Library Reduction / Cleanup||ISB - Sarah|| || || ||Web Services / Database Connectivity Guidelines||ISB - Sarah, UCSF - Alex|| || || ||Usability Assessment||Pasteur, ISB - Sarah|| || || ||Testing||AMC - Piet, Pasteur - Tero|| || || ||Undo Manager||AMC - Piet, UCSD - Peng|| || || ||Interactive Layout (Bubble, Snap-To)||UCSF - Alex, Agilent - Allan K, MSKCC - Ben|| || || ||Layers / Annotation / UI for cutsom nodes||UCSF - Alex, Agilent - Allan K, MSKCC - Ben|| || || ||Papers||Everyone|| || || ||Tutorials||Unassigned|| || || ||Bug Fixing||Everyone|| || || |
||'''Name''' ||'''Lead Group''' ||'''Time Required''' ||'''Status''' || ||Layout Manager / Broker ||UCSF - Scooter || || || ||Groups (formerly known as metanodes ||UCSF, Agilent || || || ||Hyperedges ||Aglient || || || ||Document Event Handling (write Doclets) ||Everyone || || || ||Remove Deprecation Warnings ||Everyone ||ongoing ||ongoing || ||["VizMapUI"] Redesign ||UCSD - Kei || || || ||Plugin Website / Automatic plugin download ||UCSD - Peng, ISB - Sarah ||10 weeks ||ongoing || ||Linkout from Attribute Browser ||UCSD - Kei || || || ||Create cytoscape-helpdesk ||UCSD - Peng || || || ||Peformance (speed + memory) profiling ||UCSD, AMC - Piet || || || ||GINY Refactoring ||UCSD - Mike || || || ||Properties / XML Config ||UCSD,UCSD - Scooter || || || ||Cytoscape Class Cleanup ||MSKCC - Ethan || || || ||CyAttributes Name Clashes ||MSKCC - Ethan || || || ||Pathway Commons Connectivity ||MSKCC, Gary || || || ||Filters ||MSKCC - Ethan, UCSD - Mike || || || ||Combining Attributes / Formulas ||MSKCC - Ethan, UCSF - Scooter, Alex || || || ||Library Reduction / Cleanup ||ISB - Sarah || || || ||Web Services / Database Connectivity Guidelines ||ISB - Sarah, UCSF - Alex || || || ||Usability Assessment ||Pasteur, ISB - Sarah || || || ||Testing ||AMC - Piet, Pasteur - Tero || || || ||Undo Manager ||AMC - Piet, UCSD - Peng || || || ||Interactive Layout (Bubble, Snap-To) ||UCSF - Alex, Agilent - Allan K, MSKCC - Ben || || || ||Layers / Annotation / UI for cutsom nodes ||UCSF - Alex, Agilent - Allan K, MSKCC - Ben || || || ||Papers ||Everyone || || || ||Tutorials ||Unassigned || || || ||Bug Fixing ||Everyone || || || |
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||'''Name'''||'''Lead Group'''||'''Time Required'''||'''Status'''|| |
||'''Name''' ||'''Lead Group''' ||'''Time Required''' ||'''Status''' || |
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||'''Name'''||'''Lead Group'''||'''Time Required'''||'''Status'''|| ||Custom Node / Edge Graphics (MIMS)||UCSF - Alex, Agilent - Allan K, MSKCC - Ben|| || || |
||'''Name''' ||'''Lead Group''' ||'''Time Required''' ||'''Status''' || ||Custom Node / Edge Graphics (MIMS) ||UCSF - Alex, Agilent - Allan K, MSKCC - Ben || || || |
Release 2.5 Use Cases / Overall Themes
- Pathway / Annnotation
- Usability
- Navigation / Find
Timeline
Target Release Date: June 1, 2007
Release 2.5 Features
TODO
Name |
Lead Group |
Time Required |
Status |
Layout Manager / Broker |
UCSF - Scooter |
|
|
Groups (formerly known as metanodes |
UCSF, Agilent |
|
|
Hyperedges |
Aglient |
|
|
Document Event Handling (write Doclets) |
Everyone |
|
|
Remove Deprecation Warnings |
Everyone |
ongoing |
ongoing |
["VizMapUI"] Redesign |
UCSD - Kei |
|
|
Plugin Website / Automatic plugin download |
UCSD - Peng, ISB - Sarah |
10 weeks |
ongoing |
Linkout from Attribute Browser |
UCSD - Kei |
|
|
Create cytoscape-helpdesk |
UCSD - Peng |
|
|
Peformance (speed + memory) profiling |
UCSD, AMC - Piet |
|
|
GINY Refactoring |
UCSD - Mike |
|
|
Properties / XML Config |
UCSD,UCSD - Scooter |
|
|
Cytoscape Class Cleanup |
MSKCC - Ethan |
|
|
CyAttributes Name Clashes |
MSKCC - Ethan |
|
|
Pathway Commons Connectivity |
MSKCC, Gary |
|
|
Filters |
MSKCC - Ethan, UCSD - Mike |
|
|
Combining Attributes / Formulas |
MSKCC - Ethan, UCSF - Scooter, Alex |
|
|
Library Reduction / Cleanup |
ISB - Sarah |
|
|
Web Services / Database Connectivity Guidelines |
ISB - Sarah, UCSF - Alex |
|
|
Usability Assessment |
Pasteur, ISB - Sarah |
|
|
Testing |
AMC - Piet, Pasteur - Tero |
|
|
Undo Manager |
AMC - Piet, UCSD - Peng |
|
|
Interactive Layout (Bubble, Snap-To) |
UCSF - Alex, Agilent - Allan K, MSKCC - Ben |
|
|
Layers / Annotation / UI for cutsom nodes |
UCSF - Alex, Agilent - Allan K, MSKCC - Ben |
|
|
Papers |
Everyone |
|
|
Tutorials |
Unassigned |
|
|
Bug Fixing |
Everyone |
|
|
Completed
Name |
Lead Group |
Time Required |
Status |
Postponed
Name |
Lead Group |
Time Required |
Status |
Custom Node / Edge Graphics (MIMS) |
UCSF - Alex, Agilent - Allan K, MSKCC - Ben |
|
|