Cytoscape Wiki|
← Revision 12 as of 2007-02-01 18:22:39
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← Revision 13 as of 2007-02-05 16:31:52 →
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| ||Layout Manager / Broker ||UCSF - Scooter || ||checked in/awaiting feedback|| | ||Layout Manager / Broker ||UCSF - Scooter || ||checked in/awaiting feedback || |
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| ||Linkout from Attribute Browser ||UCSD - Kei || 1-2 weeks||Prototype is already there, but need to integrate it with Linkout plugin. || | ||Linkout from Attribute Browser ||UCSD - Kei || 1-2 weeks ||Prototype is already there, but need to integrate it with Linkout plugin. || |
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| ||Properties / XML Config ||UCSD,UCSD - Scooter || 1 month (? Depends on the goal)|| Planning|| | ||Properties / XML Config ||UCSD,UCSD - Scooter || 1 month (? Depends on the goal) || Planning || |
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||Library Reduction / Cleanup ||ISB - Sarah || || || ||Web Services / Database Connectivity Guidelines ||ISB - Sarah, UCSF - Alex || || || ||Usability Assessment ||Pasteur, ISB - Sarah || || || |
||Library Reduction / Cleanup ||ISB - Sarah ||1 week||ongoing || ||Web Services / Database Connectivity Guidelines ||ISB - Sarah, UCSF - Alex ||2 weeks (more depending on goals)||ongong || ||Usability Assessment ||Pasteur, ISB - Sarah ||ongoing||ongoing || |
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Release 2.5 Use Cases / Overall Themes
- Pathway / Annnotation
- Usability
- Navigation / Find
Timeline
Target Release Date: June 1, 2007
Release 2.5 Features
TODO
Name |
Lead Group |
Time Required |
Status |
Layout Manager / Broker |
UCSF - Scooter |
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checked in/awaiting feedback |
Groups (formerly known as metanodes |
UCSF, Agilent |
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Hyperedges |
Aglient |
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Document Event Handling (write Doclets) |
Everyone |
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Remove Deprecation Warnings |
Everyone |
ongoing |
ongoing |
["VizMapUI"] Redesign |
UCSD - Kei |
Alpha release in March |
Building mockups |
Plugin Website / Automatic plugin download |
UCSD - Peng, ISB - Sarah |
10 weeks |
ongoing |
Linkout from Attribute Browser |
UCSD - Kei |
1-2 weeks |
Prototype is already there, but need to integrate it with Linkout plugin. |
Create cytoscape-helpdesk |
UCSD - Peng |
2 weeks |
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Peformance (speed + memory) profiling |
UCSD, AMC - Piet |
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GINY Refactoring |
UCSD - Mike |
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Properties / XML Config |
UCSD,UCSD - Scooter |
1 month (? Depends on the goal) |
Planning |
Cytoscape Class Cleanup |
MSKCC - Ethan |
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CyAttributes Name Clashes |
MSKCC - Ethan |
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Pathway Commons Connectivity |
MSKCC, Gary |
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Filters |
MSKCC - Ethan, UCSD - Mike |
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Combining Attributes / Formulas |
MSKCC - Ethan, UCSF - Scooter, Alex |
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Library Reduction / Cleanup |
ISB - Sarah |
1 week |
ongoing |
Web Services / Database Connectivity Guidelines |
ISB - Sarah, UCSF - Alex |
2 weeks (more depending on goals) |
ongong |
Usability Assessment |
Pasteur, ISB - Sarah |
ongoing |
ongoing |
Testing |
AMC - Piet, Pasteur - Tero |
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Undo Manager |
AMC - Piet, UCSD - Peng |
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Interactive Layout (Bubble, Snap-To) |
UCSF - Alex, Agilent - Allan K, MSKCC - Ben |
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Layers / Annotation / UI for cutsom nodes |
UCSF - Alex, Agilent - Allan K, MSKCC - Ben |
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Papers |
Everyone |
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Tutorials |
Unassigned |
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Bug Fixing |
Everyone |
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Completed
Name |
Lead Group |
Time Required |
Status |
Postponed
Name |
Lead Group |
Time Required |
Status |
Custom Node / Edge Graphics (MIMS) |
UCSF - Alex, Agilent - Allan K, MSKCC - Ben |
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